Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 AC007686.3-201ENST00000619017 3487 ntBASIC16.75■□□□□ 0.27
RC3H1Q5TC82 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 VOPP1-204ENST00000418904 1317 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 AC007336.3-201ENST00000623886 2160 ntBASIC16.74■□□□□ 0.27
RC3H1Q5TC82 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 SLURP1-201ENST00000246515 537 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 MIR193A-201ENST00000384882 88 ntBASIC16.74■□□□□ 0.27
RC3H1Q5TC82 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 AC116347.1-201ENST00000442824 720 ntBASIC16.74■□□□□ 0.27
RC3H1Q5TC82 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 VTI1BP1-201ENST00000486325 700 ntBASIC16.74■□□□□ 0.27
RC3H1Q5TC82 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 AC131009.2-201ENST00000542763 770 ntTSL 3 BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 IGHV3OR16-11-201ENST00000565524 349 ntBASIC16.74■□□□□ 0.27
RC3H1Q5TC82 ALOX12P1-201ENST00000579299 1229 ntBASIC16.74■□□□□ 0.27
RC3H1Q5TC82 RN7SL678P-201ENST00000579533 299 ntBASIC16.74■□□□□ 0.27
RC3H1Q5TC82 MIR4763-201ENST00000581461 92 ntBASIC16.74■□□□□ 0.27
RC3H1Q5TC82 AC015818.3-201ENST00000583797 589 ntBASIC16.74■□□□□ 0.27
RC3H1Q5TC82 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 AP005264.6-203ENST00000586882 1050 ntTSL 5 BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 CREBRF-203ENST00000520420 1660 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 BEND3P1-201ENST00000421591 1944 ntBASIC16.74■□□□□ 0.27
RC3H1Q5TC82 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RC3H1Q5TC82 AL590399.1-202ENST00000429818 1480 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 AL512625.1-202ENST00000476224 1480 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 AC244154.1-201ENST00000620148 1555 ntBASIC16.73■□□□□ 0.27
RC3H1Q5TC82 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 RNA5SP248-201ENST00000365602 127 ntBASIC16.73■□□□□ 0.27
RC3H1Q5TC82 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 TACR1-202ENST00000409848 1270 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 GGT8P-201ENST00000418938 532 ntBASIC16.73■□□□□ 0.27
RC3H1Q5TC82 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 RN7SL477P-201ENST00000488440 286 ntBASIC16.73■□□□□ 0.27
RC3H1Q5TC82 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 AC092435.2-201ENST00000515530 524 ntTSL 4 BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 AL606834.1-201ENST00000553836 1169 ntBASIC16.73■□□□□ 0.27
RC3H1Q5TC82 AL139317.2-201ENST00000556998 158 ntBASIC16.73■□□□□ 0.27
RC3H1Q5TC82 MARVELD3-205ENST00000567501 582 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 HCG18-241ENST00000602290 821 ntTSL 2 BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 AC021321.1-201ENST00000607397 1113 ntBASIC16.73■□□□□ 0.27
RC3H1Q5TC82 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 CDC20P1-201ENST00000488829 1500 ntBASIC16.73■□□□□ 0.27
RC3H1Q5TC82 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 ASGR2-202ENST00000355035 1386 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 AC073488.1-201ENST00000416620 1600 ntBASIC16.73■□□□□ 0.27
RC3H1Q5TC82 ABCD1P2-201ENST00000429313 1601 ntBASIC16.73■□□□□ 0.27
RC3H1Q5TC82 OLFML1-204ENST00000530135 1620 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 AC111170.3-201ENST00000624282 2464 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms