Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC10.13□□□□□ -0.79
NACAE9PAV3 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC10.13□□□□□ -0.79
NACAE9PAV3 TSPEAR-203ENST00000613245 3524 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
NACAE9PAV3 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
NACAE9PAV3 AL805961.1-203ENST00000641078 1258 ntBASIC10.13□□□□□ -0.79
NACAE9PAV3 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
NACAE9PAV3 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
NACAE9PAV3 AC004623.1-201ENST00000624592 2127 ntBASIC10.13□□□□□ -0.79
NACAE9PAV3 F2-205ENST00000530231 1849 ntTSL 5 BASIC10.13□□□□□ -0.79
NACAE9PAV3 RECQL5-204ENST00000423245 3576 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
NACAE9PAV3 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
NACAE9PAV3 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC10.13□□□□□ -0.79
NACAE9PAV3 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
NACAE9PAV3 ZNF544-208ENST00000596825 3516 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
NACAE9PAV3 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
NACAE9PAV3 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
NACAE9PAV3 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
NACAE9PAV3 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC10.13□□□□□ -0.79
NACAE9PAV3 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
NACAE9PAV3 LMX1A-202ENST00000342310 3545 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
NACAE9PAV3 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
NACAE9PAV3 PRICKLE1-215ENST00000640055 3778 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
NACAE9PAV3 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC10.13□□□□□ -0.79
NACAE9PAV3 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
NACAE9PAV3 LINC01815-202ENST00000641468 1409 ntBASIC10.13□□□□□ -0.79
NACAE9PAV3 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC10.13□□□□□ -0.79
NACAE9PAV3 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
NACAE9PAV3 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
NACAE9PAV3 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
NACAE9PAV3 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
NACAE9PAV3 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC10.13□□□□□ -0.79
NACAE9PAV3 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
NACAE9PAV3 PTPA-217ENST00000434095 870 ntTSL 2 BASIC10.13□□□□□ -0.79
NACAE9PAV3 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
NACAE9PAV3 OARD1-204ENST00000464633 717 ntTSL 2 BASIC10.13□□□□□ -0.79
NACAE9PAV3 RN7SL769P-201ENST00000469386 295 ntBASIC10.13□□□□□ -0.79
NACAE9PAV3 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC10.13□□□□□ -0.79
NACAE9PAV3 AC134698.3-201ENST00000523880 214 ntBASIC10.13□□□□□ -0.79
NACAE9PAV3 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC10.13□□□□□ -0.79
NACAE9PAV3 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC10.13□□□□□ -0.79
NACAE9PAV3 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC10.13□□□□□ -0.79
NACAE9PAV3 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC10.13□□□□□ -0.79
NACAE9PAV3 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC10.13□□□□□ -0.79
NACAE9PAV3 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
NACAE9PAV3 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
NACAE9PAV3 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
NACAE9PAV3 AC125807.2-201ENST00000513358 3514 ntBASIC10.13□□□□□ -0.79
NACAE9PAV3 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
NACAE9PAV3 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
NACAE9PAV3 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC10.13□□□□□ -0.79
NACAE9PAV3 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
NACAE9PAV3 FAM90A7P-201ENST00000382628 1395 ntBASIC10.12□□□□□ -0.79
NACAE9PAV3 FAM90A23P-201ENST00000400136 1395 ntBASIC10.12□□□□□ -0.79
NACAE9PAV3 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
NACAE9PAV3 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC10.12□□□□□ -0.79
NACAE9PAV3 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC10.12□□□□□ -0.79
NACAE9PAV3 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
NACAE9PAV3 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC10.12□□□□□ -0.79
NACAE9PAV3 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
NACAE9PAV3 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
NACAE9PAV3 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
NACAE9PAV3 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC10.12□□□□□ -0.79
NACAE9PAV3 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC10.12□□□□□ -0.79
NACAE9PAV3 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
NACAE9PAV3 CDK6-201ENST00000265734 11612 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
NACAE9PAV3 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC10.12□□□□□ -0.79
NACAE9PAV3 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
NACAE9PAV3 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC10.12□□□□□ -0.79
NACAE9PAV3 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC10.12□□□□□ -0.79
NACAE9PAV3 PCDHB18P-202ENST00000526308 3197 ntBASIC10.12□□□□□ -0.79
NACAE9PAV3 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
NACAE9PAV3 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
NACAE9PAV3 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
NACAE9PAV3 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
NACAE9PAV3 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
NACAE9PAV3 PARVA-201ENST00000334956 4458 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
NACAE9PAV3 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC10.12□□□□□ -0.79
NACAE9PAV3 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
NACAE9PAV3 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC10.12□□□□□ -0.79
NACAE9PAV3 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
NACAE9PAV3 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
NACAE9PAV3 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
NACAE9PAV3 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
NACAE9PAV3 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
NACAE9PAV3 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC10.12□□□□□ -0.79
NACAE9PAV3 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC10.12□□□□□ -0.79
NACAE9PAV3 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
NACAE9PAV3 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC10.12□□□□□ -0.79
NACAE9PAV3 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC10.12□□□□□ -0.79
NACAE9PAV3 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
NACAE9PAV3 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC10.12□□□□□ -0.79
NACAE9PAV3 IMP3P2-201ENST00000489760 475 ntBASIC10.12□□□□□ -0.79
NACAE9PAV3 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
NACAE9PAV3 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC10.12□□□□□ -0.79
NACAE9PAV3 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC10.12□□□□□ -0.79
NACAE9PAV3 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC10.12□□□□□ -0.79
NACAE9PAV3 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC10.12□□□□□ -0.79
NACAE9PAV3 PKD1-201ENST00000262304 14138 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
NACAE9PAV3 PKD1-203ENST00000423118 14135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
NACAE9PAV3 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms