RNA–Protein interactions for RNA: ENST00000640055.1

PRICKLE1-215, Transcript of prickle planar cell polarity protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRICKLE1, Length 3,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-215ENST00000640055 NISCHQ9Y2I1 1504 aa24.1■■□□□ 1.45
PRICKLE1-215ENST00000640055 DCAF8L2P0C7V8 631 aa22.86■■□□□ 1.25
PRICKLE1-215ENST00000640055 SHROOM4Q9ULL8 1493 aa22.38■■□□□ 1.17
PRICKLE1-215ENST00000640055 SUPT5HO00267 1087 aaKnown RBP22■■□□□ 1.11
PRICKLE1-215ENST00000640055 EHMT2Q96KQ7 1210 aa21.2■□□□□ 0.98
PRICKLE1-215ENST00000640055 FAM9AQ8IZU1 332 aaPredicted RBP20.67■□□□□ 0.9
PRICKLE1-215ENST00000640055 ABCC9O60706 1549 aa20.53■□□□□ 0.88
PRICKLE1-215ENST00000640055 LOC105371045A0A1W2PR82 267 aa20.33■□□□□ 0.84
PRICKLE1-215ENST00000640055 TTBK1Q5TCY1 1321 aaPredicted RBP20.27■□□□□ 0.84
PRICKLE1-215ENST00000640055 CHIC1Q5VXU3 224 aa20.22■□□□□ 0.83
PRICKLE1-215ENST00000640055 PABPN1Q86U42 306 aaKnown RBP eCLIP20.22■□□□□ 0.83
PRICKLE1-215ENST00000640055 PPARGC1BQ86YN6 1023 aaKnown RBP20.16■□□□□ 0.82
PRICKLE1-215ENST00000640055 PCGF6Q9BYE7 350 aa20.15■□□□□ 0.82
PRICKLE1-215ENST00000640055 ZCCHC6Q5VYS8 1495 aaKnown RBP20.08■□□□□ 0.81
PRICKLE1-215ENST00000640055 RANGAP1P46060 587 aaPredicted RBP20.05■□□□□ 0.8
PRICKLE1-215ENST00000640055 TRIM41Q8WV44 630 aa20.03■□□□□ 0.8
PRICKLE1-215ENST00000640055 SCRIBQ14160 1630 aa19.83■□□□□ 0.77
PRICKLE1-215ENST00000640055 CCDC180Q9P1Z9 1646 aa19.7■□□□□ 0.74
PRICKLE1-215ENST00000640055 MYO15BQ96JP2 1530 aa19.65■□□□□ 0.74
PRICKLE1-215ENST00000640055 UBTFP17480 764 aaKnown RBP19.48■□□□□ 0.71
PRICKLE1-215ENST00000640055 CECR2Q9BXF3 1484 aa19.42■□□□□ 0.7
PRICKLE1-215ENST00000640055 RSF1Q96T23 1441 aaPredicted RBP19.33■□□□□ 0.68
PRICKLE1-215ENST00000640055 ATP1B4Q9UN42 357 aaPredicted RBP19.19■□□□□ 0.66
PRICKLE1-215ENST00000640055 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.09■□□□□ 0.65
PRICKLE1-215ENST00000640055 HRCP23327 699 aa19.07■□□□□ 0.64
PRICKLE1-215ENST00000640055 TRIM26Q12899 539 aaPredicted RBP19.06■□□□□ 0.64
PRICKLE1-215ENST00000640055 MROH2BQ7Z745 1585 aa19.04■□□□□ 0.64
PRICKLE1-215ENST00000640055 CCER1Q8TC90 406 aaPredicted RBP19.03■□□□□ 0.64
PRICKLE1-215ENST00000640055 RB1CC1Q8TDY2 1594 aa19■□□□□ 0.63
PRICKLE1-215ENST00000640055 HNRNPUL2Q1KMD3 747 aaKnown RBP19■□□□□ 0.63
PRICKLE1-215ENST00000640055 ITGAEP38570 1179 aa19■□□□□ 0.63
PRICKLE1-215ENST00000640055 APLP2Q06481 763 aa18.98■□□□□ 0.63
PRICKLE1-215ENST00000640055 DCAF1Q9Y4B6 1507 aa18.9■□□□□ 0.62
PRICKLE1-215ENST00000640055 P3H3Q8IVL6 736 aa18.83■□□□□ 0.61
PRICKLE1-215ENST00000640055 WIZO95785 1651 aa18.83■□□□□ 0.61
PRICKLE1-215ENST00000640055 NACADO15069 1562 aa18.83■□□□□ 0.6
PRICKLE1-215ENST00000640055 CSRNP3Q8WYN3 585 aa18.79■□□□□ 0.6
PRICKLE1-215ENST00000640055 ABCC8Q09428 1581 aa18.74■□□□□ 0.59
PRICKLE1-215ENST00000640055 ARID3CA6NKF2 412 aa18.73■□□□□ 0.59
PRICKLE1-215ENST00000640055 SOGA1O94964 1423 aa18.68■□□□□ 0.58
PRICKLE1-215ENST00000640055 CCDC88BA6NC98 1476 aa18.61■□□□□ 0.57
PRICKLE1-215ENST00000640055 YTHDC1Q96MU7 727 aaKnown RBP18.59■□□□□ 0.57
PRICKLE1-215ENST00000640055 RUSC2Q8N2Y8 1516 aa18.56■□□□□ 0.56
PRICKLE1-215ENST00000640055 DNAJC5BQ9UF47 199 aa18.51■□□□□ 0.55
PRICKLE1-215ENST00000640055 BAZ1AQ9NRL2 1556 aaPredicted RBP18.5■□□□□ 0.55
PRICKLE1-215ENST00000640055 FBLN2P98095 1184 aa18.45■□□□□ 0.54
PRICKLE1-215ENST00000640055 BAZ1BQ9UIG0 1483 aaKnown RBP18.44■□□□□ 0.54
PRICKLE1-215ENST00000640055 WRNQ14191 1432 aaPredicted RBP eCLIP18.4■□□□□ 0.54
PRICKLE1-215ENST00000640055 FAM50AQ14320 339 aaKnown RBP18.38■□□□□ 0.53
PRICKLE1-215ENST00000640055 CNGB1Q14028 1251 aaPredicted RBP18.33■□□□□ 0.52
PRICKLE1-215ENST00000640055 CEP162Q5TB80 1403 aa18.32■□□□□ 0.52
PRICKLE1-215ENST00000640055 ZEB1P37275 1124 aaPredicted RBP18.3■□□□□ 0.52
PRICKLE1-215ENST00000640055 SMARCA4P51532 1647 aa18.28■□□□□ 0.52
PRICKLE1-215ENST00000640055 NEUROD1Q13562 356 aa18.26■□□□□ 0.51
PRICKLE1-215ENST00000640055 ATAD2BQ9ULI0 1458 aa18.24■□□□□ 0.51
PRICKLE1-215ENST00000640055 CLIP1P30622 1438 aa18.17■□□□□ 0.5
PRICKLE1-215ENST00000640055 KANK4Q5T7N3 995 aaPredicted RBP18.17■□□□□ 0.5
PRICKLE1-215ENST00000640055 TOP2AP11388 1531 aaKnown RBP18.17■□□□□ 0.5
PRICKLE1-215ENST00000640055 DIEXFQ68CQ4 756 aaKnown RBP18.15■□□□□ 0.5
PRICKLE1-215ENST00000640055 HIRIP3Q9BW71 556 aaPredicted RBP18.14■□□□□ 0.49
PRICKLE1-215ENST00000640055 SMARCA2P51531 1590 aa18.14■□□□□ 0.49
PRICKLE1-215ENST00000640055 BICRAQ9NZM4 1560 aa18.11■□□□□ 0.49
PRICKLE1-215ENST00000640055 CHIC2Q9UKJ5 165 aa18.07■□□□□ 0.48
PRICKLE1-215ENST00000640055 RAPGEF2Q9Y4G8 1499 aa18.05■□□□□ 0.48
PRICKLE1-215ENST00000640055 TDRD9Q8NDG6 1382 aaKnown RBP18.04■□□□□ 0.48
PRICKLE1-215ENST00000640055 TNIKQ9UKE5 1360 aa18.02■□□□□ 0.48
PRICKLE1-215ENST00000640055 GOLGA3Q08378 1498 aa18■□□□□ 0.47
PRICKLE1-215ENST00000640055 POLR3GLQ9BT43 218 aa18■□□□□ 0.47
PRICKLE1-215ENST00000640055 UNC13AQ9UPW8 1703 aa17.99■□□□□ 0.47
PRICKLE1-215ENST00000640055 CUX2O14529 1486 aa17.98■□□□□ 0.47
PRICKLE1-215ENST00000640055 ZNF777Q9ULD5 760 aaPredicted RBP17.96■□□□□ 0.47
PRICKLE1-215ENST00000640055 TRIM52Q96A61 297 aa17.94■□□□□ 0.46
PRICKLE1-215ENST00000640055 NESP48681 1621 aa17.94■□□□□ 0.46
PRICKLE1-215ENST00000640055 SYNJ1O43426 1573 aa17.88■□□□□ 0.45
PRICKLE1-215ENST00000640055 EIF4G1Q04637 1599 aaKnown RBP17.88■□□□□ 0.45
PRICKLE1-215ENST00000640055 KIF27Q86VH2 1401 aa17.88■□□□□ 0.45
PRICKLE1-215ENST00000640055 CEP164Q9UPV0 1460 aa17.87■□□□□ 0.45
PRICKLE1-215ENST00000640055 ZNF326Q5BKZ1 582 aaKnown RBP17.85■□□□□ 0.45
PRICKLE1-215ENST00000640055 SIN3AQ96ST3 1273 aa17.85■□□□□ 0.45
PRICKLE1-215ENST00000640055 CARMIL1Q5VZK9 1371 aa17.84■□□□□ 0.45
PRICKLE1-215ENST00000640055 RRP7BPQ9NSQ0 103 aa17.84■□□□□ 0.45
PRICKLE1-215ENST00000640055 RAD54L2Q9Y4B4 1467 aa17.84■□□□□ 0.45
PRICKLE1-215ENST00000640055 CADPSQ9ULU8 1353 aa17.83■□□□□ 0.45
PRICKLE1-215ENST00000640055 ZNF316A6NFI3 1004 aaPredicted RBP17.82■□□□□ 0.44
PRICKLE1-215ENST00000640055 MYT1LQ9UL68 1186 aa17.82■□□□□ 0.44
PRICKLE1-215ENST00000640055 SENP3-EIF4A1A0A087X0R7 540 aa17.81■□□□□ 0.44
PRICKLE1-215ENST00000640055 MIER1Q8N108 512 aa17.79■□□□□ 0.44
PRICKLE1-215ENST00000640055 CHMP7Q8WUX9 453 aaPredicted RBP17.76■□□□□ 0.43
PRICKLE1-215ENST00000640055 EEA1Q15075 1411 aa17.76■□□□□ 0.43
PRICKLE1-215ENST00000640055 SENP3Q9H4L4 574 aaPredicted RBP17.75■□□□□ 0.43
PRICKLE1-215ENST00000640055 CENPBP07199 599 aaPredicted RBP17.74■□□□□ 0.43
PRICKLE1-215ENST00000640055 GTF3C3Q9Y5Q9 886 aa17.73■□□□□ 0.43
PRICKLE1-215ENST00000640055 FOXD1Q16676 465 aa17.7■□□□□ 0.42
PRICKLE1-215ENST00000640055 FHOD3Q2V2M9 1422 aa17.7■□□□□ 0.42
PRICKLE1-215ENST00000640055 DDX10Q13206 875 aaKnown RBP17.69■□□□□ 0.42
PRICKLE1-215ENST00000640055 IGF1RP08069 1367 aa17.69■□□□□ 0.42
PRICKLE1-215ENST00000640055 VPS8Q8N3P4 1428 aa17.68■□□□□ 0.42
PRICKLE1-215ENST00000640055 NCAPD3P42695 1498 aa17.68■□□□□ 0.42
PRICKLE1-215ENST00000640055 FANCD2Q9BXW9 1451 aa17.67■□□□□ 0.42
PRICKLE1-215ENST00000640055 MTUS2Q5JR59 1369 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms