Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC11.78□□□□□ -0.52
CD40P25942 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 LINC00638-201ENST00000555578 2518 ntBASIC11.78□□□□□ -0.52
CD40P25942 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC11.78□□□□□ -0.52
CD40P25942 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CD40P25942 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CD40P25942 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CD40P25942 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
CD40P25942 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CD40P25942 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
CD40P25942 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CD40P25942 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CD40P25942 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC11.77□□□□□ -0.52
CD40P25942 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CD40P25942 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CD40P25942 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CD40P25942 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CD40P25942 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC11.77□□□□□ -0.52
CD40P25942 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
CD40P25942 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
CD40P25942 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
CD40P25942 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD40P25942 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD40P25942 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CD40P25942 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.77□□□□□ -0.53
CD40P25942 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC11.77□□□□□ -0.53
CD40P25942 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC11.77□□□□□ -0.53
CD40P25942 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD40P25942 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
CD40P25942 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
CD40P25942 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC11.77□□□□□ -0.53
CD40P25942 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC11.77□□□□□ -0.53
CD40P25942 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC11.77□□□□□ -0.53
CD40P25942 RN7SL128P-201ENST00000467883 305 ntBASIC11.77□□□□□ -0.53
CD40P25942 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CD40P25942 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC11.77□□□□□ -0.53
CD40P25942 FAM86B3P-203ENST00000523992 854 ntBASIC11.77□□□□□ -0.53
CD40P25942 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC11.77□□□□□ -0.53
CD40P25942 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC11.77□□□□□ -0.53
CD40P25942 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
CD40P25942 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC11.77□□□□□ -0.53
CD40P25942 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC11.77□□□□□ -0.53
CD40P25942 HNRNPA1P5-201ENST00000558213 966 ntBASIC11.77□□□□□ -0.53
CD40P25942 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC11.77□□□□□ -0.53
CD40P25942 MBP-238ENST00000580402 915 ntTSL 5 BASIC11.77□□□□□ -0.53
CD40P25942 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC11.77□□□□□ -0.53
CD40P25942 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC11.77□□□□□ -0.53
CD40P25942 AC026336.4-201ENST00000624565 1050 ntBASIC11.77□□□□□ -0.53
CD40P25942 ESR1-214ENST00000638569 132 ntTSL 5 BASIC11.77□□□□□ -0.53
CD40P25942 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD40P25942 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD40P25942 MEX3B-202ENST00000558133 4333 ntBASIC11.77□□□□□ -0.53
CD40P25942 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
CD40P25942 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD40P25942 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CD40P25942 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
CD40P25942 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CD40P25942 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD40P25942 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
CD40P25942 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD40P25942 ZNF493-208ENST00000599461 1769 ntBASIC11.77□□□□□ -0.53
CD40P25942 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC11.76□□□□□ -0.53
CD40P25942 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD40P25942 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD40P25942 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD40P25942 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
CD40P25942 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD40P25942 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD40P25942 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CD40P25942 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CD40P25942 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CD40P25942 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD40P25942 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
CD40P25942 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
CD40P25942 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC11.76□□□□□ -0.53
CD40P25942 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD40P25942 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD40P25942 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CD40P25942 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC11.76□□□□□ -0.53
CD40P25942 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
CD40P25942 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD40P25942 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
CD40P25942 SURF4-203ENST00000371991 715 ntTSL 3 BASIC11.76□□□□□ -0.53
CD40P25942 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD40P25942 HCG27-204ENST00000424675 895 ntTSL 3 BASIC11.76□□□□□ -0.53
CD40P25942 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC11.76□□□□□ -0.53
CD40P25942 AC104961.1-201ENST00000427605 771 ntBASIC11.76□□□□□ -0.53
CD40P25942 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC11.76□□□□□ -0.53
CD40P25942 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC11.76□□□□□ -0.53
CD40P25942 AC063952.3-201ENST00000467756 308 ntBASIC11.76□□□□□ -0.53
CD40P25942 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC11.76□□□□□ -0.53
CD40P25942 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
CD40P25942 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC11.76□□□□□ -0.53
CD40P25942 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC11.76□□□□□ -0.53
CD40P25942 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
CD40P25942 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC11.76□□□□□ -0.53
CD40P25942 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms