Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ASIC1P78348 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC15.32■□□□□ 0.04
ASIC1P78348 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC15.32■□□□□ 0.04
ASIC1P78348 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
ASIC1P78348 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ASIC1P78348 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ASIC1P78348 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC15.32■□□□□ 0.04
ASIC1P78348 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC15.32■□□□□ 0.04
ASIC1P78348 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ASIC1P78348 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ASIC1P78348 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ASIC1P78348 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ASIC1P78348 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ASIC1P78348 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ASIC1P78348 INVS-201ENST00000262456 2968 ntTSL 5 BASIC15.31■□□□□ 0.04
ASIC1P78348 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ASIC1P78348 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ASIC1P78348 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ASIC1P78348 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ASIC1P78348 PTPRVP-205ENST00000641549 5067 ntBASIC15.31■□□□□ 0.04
ASIC1P78348 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
ASIC1P78348 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ASIC1P78348 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ASIC1P78348 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC15.31■□□□□ 0.04
ASIC1P78348 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.31■□□□□ 0.04
ASIC1P78348 AL512306.1-201ENST00000432698 848 ntBASIC15.31■□□□□ 0.04
ASIC1P78348 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.31■□□□□ 0.04
ASIC1P78348 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
ASIC1P78348 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC15.31■□□□□ 0.04
ASIC1P78348 AC138701.2-201ENST00000553634 226 ntBASIC15.31■□□□□ 0.04
ASIC1P78348 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC15.31■□□□□ 0.04
ASIC1P78348 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.31■□□□□ 0.04
ASIC1P78348 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.31■□□□□ 0.04
ASIC1P78348 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC15.31■□□□□ 0.04
ASIC1P78348 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ASIC1P78348 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ASIC1P78348 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ASIC1P78348 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ASIC1P78348 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
ASIC1P78348 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ASIC1P78348 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ASIC1P78348 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ASIC1P78348 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ASIC1P78348 Z82170.1-201ENST00000625081 3192 ntBASIC15.31■□□□□ 0.04
ASIC1P78348 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC15.31■□□□□ 0.04
ASIC1P78348 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
ASIC1P78348 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ASIC1P78348 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC15.31■□□□□ 0.04
ASIC1P78348 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ASIC1P78348 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ASIC1P78348 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC15.31■□□□□ 0.04
ASIC1P78348 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC15.3■□□□□ 0.04
ASIC1P78348 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ASIC1P78348 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ASIC1P78348 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ASIC1P78348 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ASIC1P78348 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ASIC1P78348 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ASIC1P78348 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ASIC1P78348 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ASIC1P78348 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ASIC1P78348 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ASIC1P78348 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ASIC1P78348 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ASIC1P78348 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ASIC1P78348 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ASIC1P78348 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC15.3■□□□□ 0.04
ASIC1P78348 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ASIC1P78348 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ASIC1P78348 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ASIC1P78348 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
ASIC1P78348 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.3■□□□□ 0.04
ASIC1P78348 ERP29P1-201ENST00000442902 706 ntBASIC15.3■□□□□ 0.04
ASIC1P78348 CICP9-201ENST00000444451 1913 ntBASIC15.3■□□□□ 0.04
ASIC1P78348 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC15.3■□□□□ 0.04
ASIC1P78348 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.3■□□□□ 0.04
ASIC1P78348 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.3■□□□□ 0.04
ASIC1P78348 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.3■□□□□ 0.04
ASIC1P78348 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.3■□□□□ 0.04
ASIC1P78348 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.3■□□□□ 0.04
ASIC1P78348 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ASIC1P78348 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ASIC1P78348 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ASIC1P78348 MIR4522-201ENST00000584932 87 ntBASIC15.3■□□□□ 0.04
ASIC1P78348 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC15.3■□□□□ 0.04
ASIC1P78348 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC15.3■□□□□ 0.04
ASIC1P78348 AC012073.1-201ENST00000606114 1108 ntBASIC15.3■□□□□ 0.04
ASIC1P78348 AC097724.1-201ENST00000609581 426 ntBASIC15.3■□□□□ 0.04
ASIC1P78348 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ASIC1P78348 DLX4-206ENST00000611342 1662 ntBASIC15.3■□□□□ 0.04
ASIC1P78348 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ASIC1P78348 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC15.3■□□□□ 0.04
ASIC1P78348 AC091769.1-201ENST00000619576 568 ntBASIC15.3■□□□□ 0.04
ASIC1P78348 AC083964.2-201ENST00000623988 2396 ntBASIC15.3■□□□□ 0.04
ASIC1P78348 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC15.3■□□□□ 0.04
ASIC1P78348 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC15.3■□□□□ 0.04
ASIC1P78348 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ASIC1P78348 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ASIC1P78348 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ASIC1P78348 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms