Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC14.27□□□□□ -0.12
MMP13P45452 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MMP13P45452 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MMP13P45452 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.27□□□□□ -0.12
MMP13P45452 KRT8P18-201ENST00000413425 1445 ntBASIC14.27□□□□□ -0.12
MMP13P45452 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MMP13P45452 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MMP13P45452 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
MMP13P45452 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
MMP13P45452 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MMP13P45452 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MMP13P45452 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
MMP13P45452 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MMP13P45452 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
MMP13P45452 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
MMP13P45452 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.27□□□□□ -0.13
MMP13P45452 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MMP13P45452 RN7SL720P-201ENST00000488178 304 ntBASIC14.27□□□□□ -0.13
MMP13P45452 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.27□□□□□ -0.13
MMP13P45452 KLF17P1-201ENST00000547105 1126 ntBASIC14.27□□□□□ -0.13
MMP13P45452 CHMP4BP1-201ENST00000556017 588 ntBASIC14.27□□□□□ -0.13
MMP13P45452 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.27□□□□□ -0.13
MMP13P45452 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.27□□□□□ -0.13
MMP13P45452 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
MMP13P45452 AC007718.1-201ENST00000621078 280 ntBASIC14.27□□□□□ -0.13
MMP13P45452 AC006453.1-201ENST00000636037 1257 ntBASIC14.27□□□□□ -0.13
MMP13P45452 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC14.27□□□□□ -0.13
MMP13P45452 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
MMP13P45452 AL645937.6-201ENST00000641122 3727 ntBASIC14.27□□□□□ -0.13
MMP13P45452 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MMP13P45452 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MMP13P45452 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC14.27□□□□□ -0.13
MMP13P45452 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
MMP13P45452 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MMP13P45452 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
MMP13P45452 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MMP13P45452 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MMP13P45452 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
MMP13P45452 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MMP13P45452 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MMP13P45452 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MMP13P45452 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MMP13P45452 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
MMP13P45452 AOC4P-203ENST00000566825 2289 ntBASIC14.26□□□□□ -0.13
MMP13P45452 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MMP13P45452 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
MMP13P45452 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC14.26□□□□□ -0.13
MMP13P45452 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC14.26□□□□□ -0.13
MMP13P45452 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MMP13P45452 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MMP13P45452 TEKT4P2-202ENST00000559466 1312 ntBASIC14.26□□□□□ -0.13
MMP13P45452 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.26□□□□□ -0.13
MMP13P45452 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.26□□□□□ -0.13
MMP13P45452 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MMP13P45452 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.26□□□□□ -0.13
MMP13P45452 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.26□□□□□ -0.13
MMP13P45452 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
MMP13P45452 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.26□□□□□ -0.13
MMP13P45452 LINC00265-2P-201ENST00000413372 782 ntBASIC14.26□□□□□ -0.13
MMP13P45452 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.26□□□□□ -0.13
MMP13P45452 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.26□□□□□ -0.13
MMP13P45452 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.26□□□□□ -0.13
MMP13P45452 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MMP13P45452 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MMP13P45452 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.26□□□□□ -0.13
MMP13P45452 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MMP13P45452 RPL18AP8-201ENST00000486071 528 ntBASIC14.26□□□□□ -0.13
MMP13P45452 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.26□□□□□ -0.13
MMP13P45452 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.26□□□□□ -0.13
MMP13P45452 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.26□□□□□ -0.13
MMP13P45452 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC14.26□□□□□ -0.13
MMP13P45452 RN7SL665P-201ENST00000578793 300 ntBASIC14.26□□□□□ -0.13
MMP13P45452 SIGLEC18P-201ENST00000602271 909 ntBASIC14.26□□□□□ -0.13
MMP13P45452 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MMP13P45452 AL021578.1-201ENST00000613646 709 ntBASIC14.26□□□□□ -0.13
MMP13P45452 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
MMP13P45452 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
MMP13P45452 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MMP13P45452 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MMP13P45452 TBC1D27-202ENST00000424239 1573 ntBASIC14.26□□□□□ -0.13
MMP13P45452 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
MMP13P45452 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
MMP13P45452 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC14.26□□□□□ -0.13
MMP13P45452 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
MMP13P45452 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MMP13P45452 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP13P45452 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP13P45452 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MMP13P45452 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP13P45452 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP13P45452 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
MMP13P45452 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP13P45452 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MMP13P45452 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP13P45452 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP13P45452 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.25□□□□□ -0.13
MMP13P45452 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP13P45452 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP13P45452 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MMP13P45452 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms