Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 HIST1H2APS2-201ENST00000454426 370 ntBASIC17.33■□□□□ 0.36
CHL1O00533 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC17.33■□□□□ 0.36
CHL1O00533 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC17.33■□□□□ 0.36
CHL1O00533 OR4A49P-201ENST00000527050 632 ntBASIC17.33■□□□□ 0.36
CHL1O00533 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
CHL1O00533 METTL23-211ENST00000589977 617 ntTSL 3 BASIC17.33■□□□□ 0.36
CHL1O00533 PEBP1P2-201ENST00000603980 558 ntBASIC17.33■□□□□ 0.36
CHL1O00533 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC17.33■□□□□ 0.36
CHL1O00533 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC17.33■□□□□ 0.36
CHL1O00533 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHL1O00533 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC17.33■□□□□ 0.36
CHL1O00533 OR2I1P-209ENST00000641730 5365 ntBASIC17.33■□□□□ 0.36
CHL1O00533 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHL1O00533 AC104758.3-203ENST00000562938 2123 ntBASIC17.33■□□□□ 0.36
CHL1O00533 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHL1O00533 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC17.33■□□□□ 0.36
CHL1O00533 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHL1O00533 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC17.33■□□□□ 0.36
CHL1O00533 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC17.33■□□□□ 0.36
CHL1O00533 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CHL1O00533 AC026271.4-201ENST00000578214 1833 ntBASIC17.33■□□□□ 0.36
CHL1O00533 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHL1O00533 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHL1O00533 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC17.32■□□□□ 0.36
CHL1O00533 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CHL1O00533 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHL1O00533 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHL1O00533 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC17.32■□□□□ 0.36
CHL1O00533 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC17.32■□□□□ 0.36
CHL1O00533 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHL1O00533 MKRN5P-201ENST00000445263 1467 ntBASIC17.32■□□□□ 0.36
CHL1O00533 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHL1O00533 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHL1O00533 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CHL1O00533 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHL1O00533 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
CHL1O00533 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHL1O00533 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHL1O00533 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CHL1O00533 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHL1O00533 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC17.32■□□□□ 0.36
CHL1O00533 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHL1O00533 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
CHL1O00533 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CHL1O00533 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC17.32■□□□□ 0.36
CHL1O00533 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC17.32■□□□□ 0.36
CHL1O00533 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHL1O00533 IFNWP2-201ENST00000431203 580 ntBASIC17.32■□□□□ 0.36
CHL1O00533 GOLGA6L16P-201ENST00000441780 1299 ntBASIC17.32■□□□□ 0.36
CHL1O00533 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC17.32■□□□□ 0.36
CHL1O00533 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHL1O00533 KNOP1P1-201ENST00000542108 989 ntBASIC17.32■□□□□ 0.36
CHL1O00533 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC17.32■□□□□ 0.36
CHL1O00533 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
CHL1O00533 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHL1O00533 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHL1O00533 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHL1O00533 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHL1O00533 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHL1O00533 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHL1O00533 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC17.32■□□□□ 0.36
CHL1O00533 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHL1O00533 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHL1O00533 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CHL1O00533 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHL1O00533 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CHL1O00533 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHL1O00533 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
CHL1O00533 PCDHB19P-202ENST00000625133 2914 ntBASIC17.31■□□□□ 0.36
CHL1O00533 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHL1O00533 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHL1O00533 TCAF1P1-201ENST00000414990 2232 ntBASIC17.31■□□□□ 0.36
CHL1O00533 AC020931.1-201ENST00000589622 1346 ntBASIC17.31■□□□□ 0.36
CHL1O00533 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHL1O00533 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CHL1O00533 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
CHL1O00533 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHL1O00533 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHL1O00533 HSD3BP1-201ENST00000286193 1111 ntBASIC17.31■□□□□ 0.36
CHL1O00533 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHL1O00533 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHL1O00533 OR2T32P-201ENST00000403423 963 ntBASIC17.31■□□□□ 0.36
CHL1O00533 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC17.31■□□□□ 0.36
CHL1O00533 HNRNPA3P12-201ENST00000437410 1063 ntBASIC17.31■□□□□ 0.36
CHL1O00533 CCND3P1-201ENST00000438347 580 ntBASIC17.31■□□□□ 0.36
CHL1O00533 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC17.31■□□□□ 0.36
CHL1O00533 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHL1O00533 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CHL1O00533 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC17.31■□□□□ 0.36
CHL1O00533 NSD1-211ENST00000511258 809 ntTSL 3 BASIC17.31■□□□□ 0.36
CHL1O00533 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHL1O00533 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC17.31■□□□□ 0.36
CHL1O00533 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHL1O00533 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
CHL1O00533 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CHL1O00533 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC17.31■□□□□ 0.36
CHL1O00533 KRT18P40-201ENST00000599859 1571 ntBASIC17.31■□□□□ 0.36
CHL1O00533 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CHL1O00533 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHL1O00533 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms