Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 AL513497.1-201ENST00000624273 2083 ntBASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 AC041040.2-201ENST00000622926 2899 ntBASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 SNORA50D-201ENST00000408059 134 ntBASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 CDK4P1-201ENST00000454213 828 ntBASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 MTHFD2P7-201ENST00000483867 983 ntBASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 AC026412.1-206ENST00000502273 206 ntBASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 AL356740.1-201ENST00000602192 1297 ntBASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 SNORA50D-202ENST00000627561 132 ntBASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC187A0A096LP49 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
CCDC187A0A096LP49 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 CICP20-201ENST00000443330 2801 ntBASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 AC008038.1-201ENST00000634247 1314 ntBASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 AC000077.1-201ENST00000420012 953 ntBASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 PSME2P2-201ENST00000453033 700 ntBASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 DPY19L2P4-201ENST00000479881 442 ntBASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 GPX3-202ENST00000517973 612 ntTSL 3 BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 MBP-230ENST00000528160 584 ntTSL 5 BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC12.89□□□□□ -0.35
CCDC187A0A096LP49 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms