Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 PLEKHG5-205ENST00000377740 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 MARCH5-201ENST00000358935 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
APOA1P02647 CICP19-201ENST00000632944 2357 ntBASIC12.28□□□□□ -0.44
APOA1P02647 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 AC009093.2-202ENST00000620513 2079 ntBASIC12.28□□□□□ -0.44
APOA1P02647 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC12.28□□□□□ -0.44
APOA1P02647 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC12.28□□□□□ -0.44
APOA1P02647 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC12.28□□□□□ -0.44
APOA1P02647 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 ADAM8-202ENST00000445355 3279 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
APOA1P02647 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
APOA1P02647 DRAXIN-201ENST00000294485 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
APOA1P02647 SHPRH-201ENST00000275233 6649 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
APOA1P02647 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
APOA1P02647 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
APOA1P02647 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
APOA1P02647 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
APOA1P02647 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
APOA1P02647 COG4-202ENST00000393612 2756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
APOA1P02647 PTPRK-203ENST00000368207 4758 ntTSL 5 BASIC12.27□□□□□ -0.44
APOA1P02647 POM121L7P-201ENST00000329949 2404 ntBASIC12.27□□□□□ -0.44
APOA1P02647 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.27□□□□□ -0.44
APOA1P02647 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
APOA1P02647 AIF1L-204ENST00000372300 3284 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOA1P02647 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOA1P02647 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOA1P02647 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOA1P02647 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOA1P02647 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOA1P02647 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOA1P02647 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOA1P02647 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOA1P02647 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOA1P02647 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOA1P02647 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.27□□□□□ -0.45
APOA1P02647 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOA1P02647 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOA1P02647 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.27□□□□□ -0.45
APOA1P02647 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.27□□□□□ -0.45
APOA1P02647 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.27□□□□□ -0.45
APOA1P02647 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.27□□□□□ -0.45
APOA1P02647 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOA1P02647 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.27□□□□□ -0.45
APOA1P02647 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.27□□□□□ -0.45
APOA1P02647 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.27□□□□□ -0.45
APOA1P02647 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.27□□□□□ -0.45
APOA1P02647 AC104596.2-201ENST00000512793 793 ntBASIC12.27□□□□□ -0.45
APOA1P02647 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.27□□□□□ -0.45
APOA1P02647 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.27□□□□□ -0.45
APOA1P02647 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.27□□□□□ -0.45
APOA1P02647 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
APOA1P02647 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOA1P02647 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.27□□□□□ -0.45
APOA1P02647 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.27□□□□□ -0.45
APOA1P02647 IGHG2-202ENST00000641095 2594 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
APOA1P02647 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC12.27□□□□□ -0.45
APOA1P02647 MARK2P16-201ENST00000605714 1723 ntBASIC12.27□□□□□ -0.45
APOA1P02647 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.27□□□□□ -0.45
APOA1P02647 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOA1P02647 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOA1P02647 AL590824.1-201ENST00000403828 1349 ntBASIC12.27□□□□□ -0.45
APOA1P02647 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOA1P02647 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC12.27□□□□□ -0.45
APOA1P02647 PTPN1-201ENST00000371621 4008 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOA1P02647 MIGA2-201ENST00000358369 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOA1P02647 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.27□□□□□ -0.45
APOA1P02647 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC12.27□□□□□ -0.45
APOA1P02647 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.27□□□□□ -0.45
APOA1P02647 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.27□□□□□ -0.45
APOA1P02647 ANXA8-205ENST00000585281 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOA1P02647 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOA1P02647 ORAI2-210ENST00000611770 10679 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
APOA1P02647 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOA1P02647 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOA1P02647 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
APOA1P02647 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOA1P02647 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOA1P02647 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
APOA1P02647 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.26□□□□□ -0.45
APOA1P02647 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.26□□□□□ -0.45
APOA1P02647 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
APOA1P02647 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
APOA1P02647 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOA1P02647 SHPRH-211ENST00000629427 7338 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
APOA1P02647 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOA1P02647 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOA1P02647 TNKS-213ENST00000522110 2900 ntBASIC12.26□□□□□ -0.45
APOA1P02647 ELN-201ENST00000252034 3781 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOA1P02647 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.26□□□□□ -0.45
APOA1P02647 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.26□□□□□ -0.45
APOA1P02647 TSSK5P-201ENST00000423978 907 ntBASIC12.26□□□□□ -0.45
APOA1P02647 AC241585.1-201ENST00000433527 519 ntBASIC12.26□□□□□ -0.45
APOA1P02647 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms