Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ALX3O95076 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.27□□□□□ -0.45
ALX3O95076 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ALX3O95076 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.27□□□□□ -0.45
ALX3O95076 SNORA50C-201ENST00000408535 133 ntBASIC12.27□□□□□ -0.45
ALX3O95076 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.27□□□□□ -0.45
ALX3O95076 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC12.27□□□□□ -0.45
ALX3O95076 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.27□□□□□ -0.45
ALX3O95076 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ALX3O95076 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.27□□□□□ -0.45
ALX3O95076 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.27□□□□□ -0.45
ALX3O95076 AC133540.1-201ENST00000620845 1019 ntBASIC12.27□□□□□ -0.45
ALX3O95076 SNORA50.1-201ENST00000628590 135 ntBASIC12.27□□□□□ -0.45
ALX3O95076 AC008687.7-202ENST00000637404 953 ntBASIC12.27□□□□□ -0.45
ALX3O95076 SLC44A4-210ENST00000544672 2634 ntTSL 2 BASIC12.27□□□□□ -0.45
ALX3O95076 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
ALX3O95076 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ALX3O95076 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.45
ALX3O95076 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
ALX3O95076 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.27□□□□□ -0.45
ALX3O95076 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ALX3O95076 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC12.27□□□□□ -0.45
ALX3O95076 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ALX3O95076 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.27□□□□□ -0.45
ALX3O95076 CCNA1-201ENST00000255465 1879 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ALX3O95076 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ALX3O95076 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ALX3O95076 NOSTRIN-203ENST00000397209 1437 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ALX3O95076 AC022364.1-202ENST00000617468 2409 ntBASIC12.27□□□□□ -0.45
ALX3O95076 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.27□□□□□ -0.45
ALX3O95076 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ALX3O95076 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
ALX3O95076 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ALX3O95076 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ALX3O95076 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ALX3O95076 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 AC137834.1-201ENST00000548184 2107 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
ALX3O95076 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.26□□□□□ -0.45
ALX3O95076 SALL4P6-201ENST00000429385 1691 ntBASIC12.26□□□□□ -0.45
ALX3O95076 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
ALX3O95076 AP002754.1-201ENST00000506329 2349 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 SLC39A13-204ENST00000524928 3553 ntTSL 2 BASIC12.26□□□□□ -0.45
ALX3O95076 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ALX3O95076 PIGO-202ENST00000361778 2464 ntTSL 5 BASIC12.26□□□□□ -0.45
ALX3O95076 GLT8D2-201ENST00000360814 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 BRWD1P1-201ENST00000401091 371 ntBASIC12.26□□□□□ -0.45
ALX3O95076 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 AC079178.1-201ENST00000420915 656 ntBASIC12.26□□□□□ -0.45
ALX3O95076 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.26□□□□□ -0.45
ALX3O95076 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.26□□□□□ -0.45
ALX3O95076 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.26□□□□□ -0.45
ALX3O95076 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.26□□□□□ -0.45
ALX3O95076 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC12.26□□□□□ -0.45
ALX3O95076 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
ALX3O95076 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.26□□□□□ -0.45
ALX3O95076 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.26□□□□□ -0.45
ALX3O95076 MIR4783-201ENST00000580343 82 ntBASIC12.26□□□□□ -0.45
ALX3O95076 MIR4259-201ENST00000584466 101 ntBASIC12.26□□□□□ -0.45
ALX3O95076 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.26□□□□□ -0.45
ALX3O95076 AC244093.1-201ENST00000610837 814 ntBASIC12.26□□□□□ -0.45
ALX3O95076 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.26□□□□□ -0.45
ALX3O95076 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 AP000346.4-201ENST00000614827 381 ntBASIC12.26□□□□□ -0.45
ALX3O95076 AC244157.2-201ENST00000616239 1006 ntBASIC12.26□□□□□ -0.45
ALX3O95076 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
ALX3O95076 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.26□□□□□ -0.45
ALX3O95076 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.26□□□□□ -0.45
ALX3O95076 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
ALX3O95076 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.26□□□□□ -0.45
ALX3O95076 AL445250.1-201ENST00000641671 2259 ntBASIC12.26□□□□□ -0.45
ALX3O95076 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.26□□□□□ -0.45
ALX3O95076 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALX3O95076 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.26□□□□□ -0.45
ALX3O95076 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.26□□□□□ -0.45
ALX3O95076 NDRG4-204ENST00000394282 3626 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ALX3O95076 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms