Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 OLA1P2-201ENST00000395519 1264 ntBASIC14.62□□□□□ -0.07
RNF135Q8IUD6 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 AL121949.3-201ENST00000406684 385 ntBASIC14.62□□□□□ -0.07
RNF135Q8IUD6 LINC00265-2P-201ENST00000413372 782 ntBASIC14.62□□□□□ -0.07
RNF135Q8IUD6 FAM197Y6-201ENST00000420524 766 ntBASIC14.62□□□□□ -0.07
RNF135Q8IUD6 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 AL137244.1-201ENST00000422931 865 ntBASIC14.62□□□□□ -0.07
RNF135Q8IUD6 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.62□□□□□ -0.07
RNF135Q8IUD6 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 AC113347.2-201ENST00000512350 279 ntBASIC14.62□□□□□ -0.07
RNF135Q8IUD6 AC100858.1-201ENST00000514059 1228 ntBASIC14.62□□□□□ -0.07
RNF135Q8IUD6 AC078814.4-201ENST00000546650 327 ntBASIC14.62□□□□□ -0.07
RNF135Q8IUD6 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 AC138761.6-201ENST00000583997 1423 ntBASIC14.62□□□□□ -0.07
RNF135Q8IUD6 AC005777.1-201ENST00000588332 187 ntBASIC14.62□□□□□ -0.07
RNF135Q8IUD6 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 LAP3P2-201ENST00000454686 1454 ntBASIC14.62□□□□□ -0.07
RNF135Q8IUD6 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF135Q8IUD6 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 AC098657.1-201ENST00000416270 1135 ntBASIC14.61□□□□□ -0.07
RNF135Q8IUD6 FAM21EP-201ENST00000417804 985 ntBASIC14.61□□□□□ -0.07
RNF135Q8IUD6 AC136604.1-202ENST00000425471 771 ntBASIC14.61□□□□□ -0.07
RNF135Q8IUD6 KRT18P62-201ENST00000446618 1287 ntBASIC14.61□□□□□ -0.07
RNF135Q8IUD6 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 PRSS3P1-201ENST00000503996 742 ntBASIC14.61□□□□□ -0.07
RNF135Q8IUD6 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 AC120498.7-201ENST00000562876 330 ntBASIC14.61□□□□□ -0.07
RNF135Q8IUD6 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 AC104506.1-201ENST00000609247 429 ntBASIC14.61□□□□□ -0.07
RNF135Q8IUD6 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC14.61□□□□□ -0.07
RNF135Q8IUD6 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF135Q8IUD6 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms