Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.08
TUBP50607 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TUBP50607 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC14.52□□□□□ -0.08
TUBP50607 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TUBP50607 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TUBP50607 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBP50607 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBP50607 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
TUBP50607 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBP50607 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TUBP50607 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TUBP50607 DKKL1P1-201ENST00000400550 698 ntBASIC14.52□□□□□ -0.09
TUBP50607 AL357563.1-201ENST00000404728 395 ntBASIC14.52□□□□□ -0.09
TUBP50607 MIR1307-201ENST00000408840 149 ntBASIC14.52□□□□□ -0.09
TUBP50607 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC14.52□□□□□ -0.09
TUBP50607 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TUBP50607 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.52□□□□□ -0.09
TUBP50607 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC14.52□□□□□ -0.09
TUBP50607 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TUBP50607 RN7SKP155-201ENST00000516031 288 ntBASIC14.52□□□□□ -0.09
TUBP50607 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.52□□□□□ -0.09
TUBP50607 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC14.52□□□□□ -0.09
TUBP50607 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TUBP50607 AL132994.1-201ENST00000554098 400 ntBASIC14.52□□□□□ -0.09
TUBP50607 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC14.52□□□□□ -0.09
TUBP50607 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TUBP50607 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBP50607 AL132780.4-201ENST00000624870 1135 ntBASIC14.52□□□□□ -0.09
TUBP50607 HELLS-212ENST00000630929 400 ntTSL 5 BASIC14.52□□□□□ -0.09
TUBP50607 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TUBP50607 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBP50607 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBP50607 VENTXP1-201ENST00000569334 2716 ntBASIC14.52□□□□□ -0.09
TUBP50607 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBP50607 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBP50607 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBP50607 PES1P2-201ENST00000449745 1735 ntBASIC14.52□□□□□ -0.09
TUBP50607 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBP50607 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TUBP50607 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TUBP50607 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBP50607 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.52□□□□□ -0.09
TUBP50607 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TUBP50607 AC008620.2-201ENST00000510294 1569 ntBASIC14.51□□□□□ -0.09
TUBP50607 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
TUBP50607 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBP50607 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBP50607 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBP50607 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBP50607 AC025183.3-201ENST00000623526 1482 ntBASIC14.51□□□□□ -0.09
TUBP50607 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBP50607 PCDHB18P-202ENST00000526308 3197 ntBASIC14.51□□□□□ -0.09
TUBP50607 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBP50607 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.51□□□□□ -0.09
TUBP50607 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TUBP50607 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBP50607 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TUBP50607 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBP50607 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBP50607 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC14.51□□□□□ -0.09
TUBP50607 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
TUBP50607 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TUBP50607 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TUBP50607 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBP50607 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBP50607 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBP50607 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBP50607 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TUBP50607 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC14.51□□□□□ -0.09
TUBP50607 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC14.51□□□□□ -0.09
TUBP50607 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TUBP50607 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBP50607 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC14.51□□□□□ -0.09
TUBP50607 GNG10P1-201ENST00000452289 199 ntBASIC14.51□□□□□ -0.09
TUBP50607 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC14.51□□□□□ -0.09
TUBP50607 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC14.51□□□□□ -0.09
TUBP50607 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC14.51□□□□□ -0.09
TUBP50607 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC14.51□□□□□ -0.09
TUBP50607 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC14.51□□□□□ -0.09
TUBP50607 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
TUBP50607 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TUBP50607 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.51□□□□□ -0.09
TUBP50607 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBP50607 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TUBP50607 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBP50607 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBP50607 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TUBP50607 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
TUBP50607 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBP50607 AC117503.4-201ENST00000623229 1418 ntBASIC14.5□□□□□ -0.09
TUBP50607 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBP50607 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBP50607 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
TUBP50607 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBP50607 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TUBP50607 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC14.5□□□□□ -0.09
TUBP50607 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBP50607 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TUBP50607 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TUBP50607 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms