Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
KDM5CP41229 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDM5CP41229 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC19.78■□□□□ 0.76
KDM5CP41229 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDM5CP41229 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDM5CP41229 SGCE-201ENST00000265735 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDM5CP41229 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
KDM5CP41229 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDM5CP41229 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDM5CP41229 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDM5CP41229 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC19.78■□□□□ 0.76
KDM5CP41229 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDM5CP41229 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDM5CP41229 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC19.78■□□□□ 0.76
KDM5CP41229 PCTP-202ENST00000325214 1856 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KDM5CP41229 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
KDM5CP41229 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KDM5CP41229 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
KDM5CP41229 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDM5CP41229 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDM5CP41229 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDM5CP41229 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDM5CP41229 KRBOX4-203ENST00000377919 993 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
KDM5CP41229 AC004884.1-201ENST00000393647 319 ntBASIC19.78■□□□□ 0.76
KDM5CP41229 LINC00544-201ENST00000400540 1031 ntTSL 5 BASIC19.78■□□□□ 0.76
KDM5CP41229 AC010163.1-201ENST00000434440 520 ntTSL 2 BASIC19.78■□□□□ 0.76
KDM5CP41229 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC19.78■□□□□ 0.76
KDM5CP41229 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC19.78■□□□□ 0.76
KDM5CP41229 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KDM5CP41229 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KDM5CP41229 AC009132.1-201ENST00000565194 320 ntBASIC19.78■□□□□ 0.76
KDM5CP41229 AC022211.3-201ENST00000584339 400 ntTSL 3 BASIC19.78■□□□□ 0.76
KDM5CP41229 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC19.78■□□□□ 0.76
KDM5CP41229 RN7SL827P-201ENST00000607480 288 ntBASIC19.78■□□□□ 0.76
KDM5CP41229 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDM5CP41229 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDM5CP41229 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
KDM5CP41229 AC009093.9-201ENST00000566038 1611 ntBASIC19.77■□□□□ 0.76
KDM5CP41229 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC19.77■□□□□ 0.76
KDM5CP41229 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
KDM5CP41229 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KDM5CP41229 RBP1-201ENST00000232219 898 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KDM5CP41229 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KDM5CP41229 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KDM5CP41229 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC19.77■□□□□ 0.76
KDM5CP41229 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC19.77■□□□□ 0.76
KDM5CP41229 OR4C3-202ENST00000611380 597 ntBASIC19.77■□□□□ 0.76
KDM5CP41229 RN7SL341P-201ENST00000613745 298 ntBASIC19.77■□□□□ 0.76
KDM5CP41229 RBP1-206ENST00000617459 667 ntTSL 2 BASIC19.77■□□□□ 0.76
KDM5CP41229 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KDM5CP41229 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KDM5CP41229 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
KDM5CP41229 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
KDM5CP41229 APTX-201ENST00000309615 1859 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KDM5CP41229 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KDM5CP41229 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KDM5CP41229 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
KDM5CP41229 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.75
KDM5CP41229 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
KDM5CP41229 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
KDM5CP41229 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC19.76■□□□□ 0.75
KDM5CP41229 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM5CP41229 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KDM5CP41229 LINC02381-202ENST00000635070 1341 ntTSL 5 BASIC19.76■□□□□ 0.75
KDM5CP41229 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KDM5CP41229 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM5CP41229 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM5CP41229 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC19.76■□□□□ 0.75
KDM5CP41229 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM5CP41229 NBEAP3-201ENST00000420638 1493 ntBASIC19.76■□□□□ 0.75
KDM5CP41229 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
KDM5CP41229 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC19.76■□□□□ 0.75
KDM5CP41229 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KDM5CP41229 NXPE4-201ENST00000375478 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM5CP41229 FAM76A-202ENST00000234549 992 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KDM5CP41229 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
KDM5CP41229 THYN1-202ENST00000352327 835 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KDM5CP41229 BNIP1-203ENST00000352523 1143 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KDM5CP41229 PRADC1P1-201ENST00000412317 525 ntBASIC19.76■□□□□ 0.75
KDM5CP41229 ATP6AP2-202ENST00000423649 1093 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
KDM5CP41229 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC19.76■□□□□ 0.75
KDM5CP41229 FAM76A-207ENST00000530324 1027 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM5CP41229 AC002519.2-201ENST00000563575 539 ntTSL 4 BASIC19.76■□□□□ 0.75
KDM5CP41229 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
KDM5CP41229 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC19.76■□□□□ 0.75
KDM5CP41229 AC015912.3-201ENST00000619432 348 ntBASIC19.76■□□□□ 0.75
KDM5CP41229 AC020763.2-201ENST00000623155 1255 ntBASIC19.76■□□□□ 0.75
KDM5CP41229 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC19.76■□□□□ 0.75
KDM5CP41229 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC19.76■□□□□ 0.75
KDM5CP41229 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC19.76■□□□□ 0.75
KDM5CP41229 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM5CP41229 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM5CP41229 AL359881.3-201ENST00000602640 1721 ntBASIC19.76■□□□□ 0.75
KDM5CP41229 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
KDM5CP41229 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM5CP41229 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM5CP41229 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KDM5CP41229 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KDM5CP41229 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KDM5CP41229 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms