Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.65□□□□□ -0.38
RFC3P40938 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
RFC3P40938 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RFC3P40938 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RFC3P40938 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RFC3P40938 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RFC3P40938 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RFC3P40938 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
RFC3P40938 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC12.65□□□□□ -0.38
RFC3P40938 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
RFC3P40938 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC12.65□□□□□ -0.38
RFC3P40938 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC12.65□□□□□ -0.38
RFC3P40938 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RFC3P40938 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.65□□□□□ -0.38
RFC3P40938 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC12.65□□□□□ -0.38
RFC3P40938 AL157792.1-201ENST00000488281 530 ntBASIC12.65□□□□□ -0.38
RFC3P40938 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RFC3P40938 AC093300.1-201ENST00000510368 1201 ntBASIC12.65□□□□□ -0.38
RFC3P40938 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC12.65□□□□□ -0.38
RFC3P40938 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC12.65□□□□□ -0.38
RFC3P40938 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
RFC3P40938 BATF-202ENST00000555504 361 ntTSL 2 BASIC12.65□□□□□ -0.38
RFC3P40938 AL049840.2-201ENST00000602722 535 ntBASIC12.65□□□□□ -0.38
RFC3P40938 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
RFC3P40938 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RFC3P40938 AC019294.4-201ENST00000561777 2905 ntBASIC12.65□□□□□ -0.38
RFC3P40938 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RFC3P40938 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RFC3P40938 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.65□□□□□ -0.38
RFC3P40938 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.65□□□□□ -0.38
RFC3P40938 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
RFC3P40938 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RFC3P40938 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.65□□□□□ -0.38
RFC3P40938 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.65□□□□□ -0.38
RFC3P40938 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RFC3P40938 RCC2P1-201ENST00000452257 1476 ntBASIC12.65□□□□□ -0.38
RFC3P40938 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.65□□□□□ -0.39
RFC3P40938 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.39
RFC3P40938 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
RFC3P40938 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFC3P40938 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFC3P40938 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFC3P40938 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RFC3P40938 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFC3P40938 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFC3P40938 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.64□□□□□ -0.39
RFC3P40938 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFC3P40938 AC117503.4-201ENST00000623229 1418 ntBASIC12.64□□□□□ -0.39
RFC3P40938 DMBT1P1-203ENST00000636837 4628 ntBASIC12.64□□□□□ -0.39
RFC3P40938 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RFC3P40938 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFC3P40938 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.64□□□□□ -0.39
RFC3P40938 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFC3P40938 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
RFC3P40938 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFC3P40938 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFC3P40938 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
RFC3P40938 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
RFC3P40938 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
RFC3P40938 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RFC3P40938 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.64□□□□□ -0.39
RFC3P40938 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
RFC3P40938 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.64□□□□□ -0.39
RFC3P40938 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
RFC3P40938 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RFC3P40938 AC005722.1-201ENST00000431878 964 ntBASIC12.64□□□□□ -0.39
RFC3P40938 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC12.64□□□□□ -0.39
RFC3P40938 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC12.64□□□□□ -0.39
RFC3P40938 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
RFC3P40938 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.64□□□□□ -0.39
RFC3P40938 AREG-202ENST00000502307 956 ntTSL 5 BASIC12.64□□□□□ -0.39
RFC3P40938 TREHP1-201ENST00000531328 465 ntBASIC12.64□□□□□ -0.39
RFC3P40938 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC12.64□□□□□ -0.39
RFC3P40938 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC12.64□□□□□ -0.39
RFC3P40938 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12.64□□□□□ -0.39
RFC3P40938 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC12.64□□□□□ -0.39
RFC3P40938 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC12.64□□□□□ -0.39
RFC3P40938 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC12.64□□□□□ -0.39
RFC3P40938 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RFC3P40938 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFC3P40938 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFC3P40938 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.64□□□□□ -0.39
RFC3P40938 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFC3P40938 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC12.64□□□□□ -0.39
RFC3P40938 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC12.64□□□□□ -0.39
RFC3P40938 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
RFC3P40938 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFC3P40938 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RFC3P40938 AC008620.2-201ENST00000510294 1569 ntBASIC12.64□□□□□ -0.39
RFC3P40938 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.64□□□□□ -0.39
RFC3P40938 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFC3P40938 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RFC3P40938 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RFC3P40938 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFC3P40938 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RFC3P40938 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.64□□□□□ -0.39
RFC3P40938 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFC3P40938 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RFC3P40938 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RFC3P40938 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms