Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 CTAGE10P-201ENST00000318353 2408 ntBASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 KRT8P43-201ENST00000406052 1458 ntBASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 MTX1P1-201ENST00000440904 838 ntBASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 DUX4L45-201ENST00000566406 1057 ntBASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 AC009542.2-202ENST00000619004 1067 ntBASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 AC003958.1-201ENST00000435883 421 ntBASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 AC104073.2-201ENST00000453737 312 ntBASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 AC104989.1-201ENST00000519711 778 ntBASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 SNORD3B-2-202ENST00000571722 791 ntBASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 AC090164.2-201ENST00000611487 516 ntBASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 AL096828.3-201ENST00000615354 462 ntBASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 AC068587.8-201ENST00000641239 219 ntBASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 LINC02228-202ENST00000641261 2489 ntBASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BBS1Q8NFJ9 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
BBS1Q8NFJ9 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
BBS1Q8NFJ9 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.43
BBS1Q8NFJ9 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
BBS1Q8NFJ9 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.4□□□□□ -0.43
BBS1Q8NFJ9 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms