Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TPM3P06753 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.48■□□□□ 0.07
TPM3P06753 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
TPM3P06753 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TPM3P06753 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC15.48■□□□□ 0.07
TPM3P06753 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.48■□□□□ 0.07
TPM3P06753 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TPM3P06753 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.48■□□□□ 0.07
TPM3P06753 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.48■□□□□ 0.07
TPM3P06753 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.48■□□□□ 0.07
TPM3P06753 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.48■□□□□ 0.07
TPM3P06753 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TPM3P06753 CICP9-201ENST00000444451 1913 ntBASIC15.48■□□□□ 0.07
TPM3P06753 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC15.48■□□□□ 0.07
TPM3P06753 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.48■□□□□ 0.07
TPM3P06753 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TPM3P06753 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TPM3P06753 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
TPM3P06753 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TPM3P06753 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC15.47■□□□□ 0.07
TPM3P06753 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC15.47■□□□□ 0.07
TPM3P06753 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TPM3P06753 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TPM3P06753 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TPM3P06753 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TPM3P06753 PAM-203ENST00000346918 3302 ntTSL 5 BASIC15.47■□□□□ 0.07
TPM3P06753 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TPM3P06753 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.47■□□□□ 0.07
TPM3P06753 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TPM3P06753 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TPM3P06753 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC15.47■□□□□ 0.07
TPM3P06753 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TPM3P06753 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TPM3P06753 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.47■□□□□ 0.07
TPM3P06753 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
TPM3P06753 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TPM3P06753 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
TPM3P06753 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC15.47■□□□□ 0.07
TPM3P06753 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
TPM3P06753 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TPM3P06753 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.47■□□□□ 0.07
TPM3P06753 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC15.47■□□□□ 0.07
TPM3P06753 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.47■□□□□ 0.07
TPM3P06753 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TPM3P06753 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.47■□□□□ 0.07
TPM3P06753 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TPM3P06753 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TPM3P06753 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.47■□□□□ 0.07
TPM3P06753 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TPM3P06753 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TPM3P06753 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.47■□□□□ 0.07
TPM3P06753 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TPM3P06753 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC15.47■□□□□ 0.07
TPM3P06753 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.47■□□□□ 0.07
TPM3P06753 AC015967.2-201ENST00000624092 234 ntBASIC15.47■□□□□ 0.07
TPM3P06753 AC006435.4-201ENST00000625037 234 ntBASIC15.47■□□□□ 0.07
TPM3P06753 AL356737.1-201ENST00000634391 234 ntBASIC15.47■□□□□ 0.07
TPM3P06753 AL139424.3-202ENST00000641619 917 ntBASIC15.47■□□□□ 0.07
TPM3P06753 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC15.47■□□□□ 0.07
TPM3P06753 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC15.47■□□□□ 0.07
TPM3P06753 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TPM3P06753 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TPM3P06753 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TPM3P06753 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC15.47■□□□□ 0.07
TPM3P06753 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC15.47■□□□□ 0.07
TPM3P06753 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC15.47■□□□□ 0.07
TPM3P06753 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TPM3P06753 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TPM3P06753 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TPM3P06753 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TPM3P06753 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
TPM3P06753 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.46■□□□□ 0.07
TPM3P06753 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TPM3P06753 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TPM3P06753 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.46■□□□□ 0.07
TPM3P06753 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.46■□□□□ 0.07
TPM3P06753 STX3-207ENST00000633708 3111 ntTSL 5 BASIC15.46■□□□□ 0.07
TPM3P06753 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC15.46■□□□□ 0.07
TPM3P06753 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TPM3P06753 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TPM3P06753 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
TPM3P06753 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TPM3P06753 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TPM3P06753 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TPM3P06753 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TPM3P06753 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TPM3P06753 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms