Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.43□□□□□ -0.42
SUMO3P55854 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.43□□□□□ -0.42
SUMO3P55854 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.42□□□□□ -0.42
SUMO3P55854 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SUMO3P55854 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SUMO3P55854 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SUMO3P55854 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SUMO3P55854 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SUMO3P55854 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SUMO3P55854 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SUMO3P55854 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SUMO3P55854 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC12.42□□□□□ -0.42
SUMO3P55854 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC12.42□□□□□ -0.42
SUMO3P55854 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SUMO3P55854 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.42□□□□□ -0.42
SUMO3P55854 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SUMO3P55854 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SUMO3P55854 AC010970.1-201ENST00000445125 1848 ntBASIC12.42□□□□□ -0.42
SUMO3P55854 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC12.42□□□□□ -0.42
SUMO3P55854 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SUMO3P55854 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.42□□□□□ -0.42
SUMO3P55854 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SUMO3P55854 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC12.42□□□□□ -0.42
SUMO3P55854 Z69890.1-201ENST00000382990 339 ntBASIC12.42□□□□□ -0.42
SUMO3P55854 SNU13-204ENST00000402458 462 ntTSL 3 BASIC12.42□□□□□ -0.42
SUMO3P55854 SERF2-206ENST00000409291 807 ntTSL 3 BASIC12.42□□□□□ -0.42
SUMO3P55854 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC12.42□□□□□ -0.42
SUMO3P55854 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC12.42□□□□□ -0.42
SUMO3P55854 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC12.42□□□□□ -0.42
SUMO3P55854 RPL7P35-201ENST00000446943 740 ntBASIC12.42□□□□□ -0.42
SUMO3P55854 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC12.42□□□□□ -0.42
SUMO3P55854 GULOP-201ENST00000454030 748 ntBASIC12.42□□□□□ -0.42
SUMO3P55854 RN7SL23P-201ENST00000484055 275 ntBASIC12.42□□□□□ -0.42
SUMO3P55854 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC12.42□□□□□ -0.42
SUMO3P55854 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC12.42□□□□□ -0.42
SUMO3P55854 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SUMO3P55854 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC12.42□□□□□ -0.42
SUMO3P55854 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SUMO3P55854 COX6A1P2-201ENST00000620597 330 ntBASIC12.42□□□□□ -0.42
SUMO3P55854 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC12.42□□□□□ -0.42
SUMO3P55854 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC12.42□□□□□ -0.42
SUMO3P55854 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SUMO3P55854 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SUMO3P55854 AC104581.4-201ENST00000623126 3052 ntBASIC12.42□□□□□ -0.42
SUMO3P55854 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.42□□□□□ -0.42
SUMO3P55854 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SUMO3P55854 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SUMO3P55854 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SUMO3P55854 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.42□□□□□ -0.42
SUMO3P55854 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.42□□□□□ -0.42
SUMO3P55854 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
SUMO3P55854 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.42□□□□□ -0.42
SUMO3P55854 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SUMO3P55854 KRT8P42-201ENST00000405771 1399 ntBASIC12.42□□□□□ -0.42
SUMO3P55854 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SUMO3P55854 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC12.42□□□□□ -0.42
SUMO3P55854 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SUMO3P55854 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.42□□□□□ -0.42
SUMO3P55854 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.41□□□□□ -0.42
SUMO3P55854 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.41□□□□□ -0.42
SUMO3P55854 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 AC006480.2-201ENST00000609770 1337 ntBASIC12.41□□□□□ -0.42
SUMO3P55854 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SUMO3P55854 TCAF1P1-201ENST00000414990 2232 ntBASIC12.41□□□□□ -0.42
SUMO3P55854 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.41□□□□□ -0.42
SUMO3P55854 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC12.41□□□□□ -0.42
SUMO3P55854 ACTG1P19-201ENST00000418987 1116 ntBASIC12.41□□□□□ -0.42
SUMO3P55854 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC12.41□□□□□ -0.42
SUMO3P55854 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC12.41□□□□□ -0.42
SUMO3P55854 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC12.41□□□□□ -0.42
SUMO3P55854 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.41□□□□□ -0.42
SUMO3P55854 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 RN7SL181P-201ENST00000462921 277 ntBASIC12.41□□□□□ -0.42
SUMO3P55854 TMCO5B-205ENST00000530020 894 ntBASIC12.41□□□□□ -0.42
SUMO3P55854 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.41□□□□□ -0.42
SUMO3P55854 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.41□□□□□ -0.42
SUMO3P55854 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
SUMO3P55854 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC12.41□□□□□ -0.42
SUMO3P55854 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC12.41□□□□□ -0.42
SUMO3P55854 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms