Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
O00370 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
O00370 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.7□□□□□ -0.06
O00370 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.7□□□□□ -0.06
O00370 ZNF493-208ENST00000599461 1769 ntBASIC14.7□□□□□ -0.06
O00370 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
O00370 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
O00370 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
O00370 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.7□□□□□ -0.06
O00370 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
O00370 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
O00370 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
O00370 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC14.7□□□□□ -0.06
O00370 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC14.7□□□□□ -0.06
O00370 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
O00370 MANEA-AS1-201ENST00000564541 2268 ntBASIC14.7□□□□□ -0.06
O00370 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC14.7□□□□□ -0.06
O00370 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
O00370 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
O00370 AC106827.1-201ENST00000366454 431 ntBASIC14.7□□□□□ -0.06
O00370 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
O00370 AP000356.3-201ENST00000382243 753 ntBASIC14.7□□□□□ -0.06
O00370 MIR1307-201ENST00000408840 149 ntBASIC14.7□□□□□ -0.06
O00370 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
O00370 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC14.7□□□□□ -0.06
O00370 RN7SL767P-201ENST00000493013 295 ntBASIC14.7□□□□□ -0.06
O00370 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC14.7□□□□□ -0.06
O00370 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC14.7□□□□□ -0.06
O00370 KRT8P2-201ENST00000556193 944 ntBASIC14.7□□□□□ -0.06
O00370 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC14.7□□□□□ -0.06
O00370 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
O00370 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
O00370 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC14.7□□□□□ -0.06
O00370 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC14.7□□□□□ -0.06
O00370 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
O00370 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
O00370 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC14.7□□□□□ -0.06
O00370 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.7□□□□□ -0.06
O00370 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
O00370 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
O00370 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
O00370 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
O00370 AL358781.1-202ENST00000321081 1360 ntBASIC14.7□□□□□ -0.06
O00370 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
O00370 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
O00370 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
O00370 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC14.7□□□□□ -0.06
O00370 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
O00370 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
O00370 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 AC074138.1-201ENST00000611182 1303 ntBASIC14.69□□□□□ -0.06
O00370 PCDHB18P-202ENST00000526308 3197 ntBASIC14.69□□□□□ -0.06
O00370 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC14.69□□□□□ -0.06
O00370 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 AL355102.3-201ENST00000554299 1678 ntBASIC14.69□□□□□ -0.06
O00370 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
O00370 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
O00370 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 CELP-201ENST00000411440 1249 ntTSL 5 BASIC14.69□□□□□ -0.06
O00370 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.69□□□□□ -0.06
O00370 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 MAGEA5-201ENST00000446757 942 ntBASIC14.69□□□□□ -0.06
O00370 FGFR3P1-201ENST00000449999 601 ntBASIC14.69□□□□□ -0.06
O00370 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
O00370 RNA5SP423-201ENST00000517127 109 ntBASIC14.69□□□□□ -0.06
O00370 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.69□□□□□ -0.06
O00370 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC14.69□□□□□ -0.06
O00370 SNORD3B-1-201ENST00000577988 758 ntBASIC14.69□□□□□ -0.06
O00370 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.69□□□□□ -0.06
O00370 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 MEX3B-202ENST00000558133 4333 ntBASIC14.69□□□□□ -0.06
O00370 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.69□□□□□ -0.06
O00370 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.69□□□□□ -0.06
O00370 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
O00370 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
O00370 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
O00370 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
O00370 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
O00370 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms