Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 RPL35-206ENST00000629845 340 ntTSL 5 BASIC10.21□□□□□ -0.77
NACAE9PAV3 AL356737.1-201ENST00000634391 234 ntBASIC10.21□□□□□ -0.77
NACAE9PAV3 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
NACAE9PAV3 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.77
NACAE9PAV3 ORAI2-201ENST00000356387 10811 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
NACAE9PAV3 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
NACAE9PAV3 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
NACAE9PAV3 AMT-239ENST00000636865 1914 ntTSL 5 BASIC10.21□□□□□ -0.77
NACAE9PAV3 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC10.21□□□□□ -0.77
NACAE9PAV3 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC10.21□□□□□ -0.77
NACAE9PAV3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC10.21□□□□□ -0.77
NACAE9PAV3 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC10.21□□□□□ -0.77
NACAE9PAV3 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
NACAE9PAV3 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
NACAE9PAV3 NELL2-203ENST00000429094 3612 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
NACAE9PAV3 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
NACAE9PAV3 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
NACAE9PAV3 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
NACAE9PAV3 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
NACAE9PAV3 AC083964.2-201ENST00000623988 2396 ntBASIC10.21□□□□□ -0.78
NACAE9PAV3 ADAMTS4-202ENST00000367996 9773 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
NACAE9PAV3 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC10.21□□□□□ -0.78
NACAE9PAV3 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
NACAE9PAV3 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC10.21□□□□□ -0.78
NACAE9PAV3 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
NACAE9PAV3 VCPIP1-201ENST00000310421 9942 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
NACAE9PAV3 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
NACAE9PAV3 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
NACAE9PAV3 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.78
NACAE9PAV3 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
NACAE9PAV3 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC10.21□□□□□ -0.78
NACAE9PAV3 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC10.21□□□□□ -0.78
NACAE9PAV3 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
NACAE9PAV3 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC10.21□□□□□ -0.78
NACAE9PAV3 NEXMIF-201ENST00000055682 11719 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
NACAE9PAV3 CHFR-201ENST00000266880 11133 ntTSL 2 BASIC10.21□□□□□ -0.78
NACAE9PAV3 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
NACAE9PAV3 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
NACAE9PAV3 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
NACAE9PAV3 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC10.21□□□□□ -0.78
NACAE9PAV3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC10.21□□□□□ -0.78
NACAE9PAV3 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC10.21□□□□□ -0.78
NACAE9PAV3 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC10.21□□□□□ -0.78
NACAE9PAV3 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC10.21□□□□□ -0.78
NACAE9PAV3 HNRNPA1P63-201ENST00000427917 963 ntBASIC10.21□□□□□ -0.78
NACAE9PAV3 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC10.21□□□□□ -0.78
NACAE9PAV3 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC10.21□□□□□ -0.78
NACAE9PAV3 AL035414.1-201ENST00000451327 857 ntBASIC10.21□□□□□ -0.78
NACAE9PAV3 RNA5SP423-201ENST00000517127 109 ntBASIC10.21□□□□□ -0.78
NACAE9PAV3 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC10.21□□□□□ -0.78
NACAE9PAV3 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC10.21□□□□□ -0.78
NACAE9PAV3 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
NACAE9PAV3 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC10.21□□□□□ -0.78
NACAE9PAV3 KRT18P8-201ENST00000581937 1246 ntBASIC10.21□□□□□ -0.78
NACAE9PAV3 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC10.21□□□□□ -0.78
NACAE9PAV3 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC10.21□□□□□ -0.78
NACAE9PAV3 AF254983.2-201ENST00000612331 135 ntBASIC10.21□□□□□ -0.78
NACAE9PAV3 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC10.21□□□□□ -0.78
NACAE9PAV3 AC133540.1-201ENST00000620845 1019 ntBASIC10.21□□□□□ -0.78
NACAE9PAV3 AC091812.3-201ENST00000621362 345 ntBASIC10.21□□□□□ -0.78
NACAE9PAV3 AL161773.1-201ENST00000624845 863 ntBASIC10.21□□□□□ -0.78
NACAE9PAV3 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
NACAE9PAV3 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC10.21□□□□□ -0.78
NACAE9PAV3 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
NACAE9PAV3 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC10.21□□□□□ -0.78
NACAE9PAV3 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.78
NACAE9PAV3 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC10.21□□□□□ -0.78
NACAE9PAV3 GOLGA8IP-202ENST00000611635 2100 ntBASIC10.2□□□□□ -0.78
NACAE9PAV3 LINC00638-201ENST00000555578 2518 ntBASIC10.2□□□□□ -0.78
NACAE9PAV3 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
NACAE9PAV3 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
NACAE9PAV3 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
NACAE9PAV3 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
NACAE9PAV3 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
NACAE9PAV3 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
NACAE9PAV3 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
NACAE9PAV3 AL591122.2-201ENST00000624125 1853 ntBASIC10.2□□□□□ -0.78
NACAE9PAV3 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
NACAE9PAV3 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
NACAE9PAV3 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC10.2□□□□□ -0.78
NACAE9PAV3 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
NACAE9PAV3 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
NACAE9PAV3 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
NACAE9PAV3 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC10.2□□□□□ -0.78
NACAE9PAV3 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
NACAE9PAV3 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
NACAE9PAV3 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
NACAE9PAV3 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
NACAE9PAV3 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
NACAE9PAV3 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
NACAE9PAV3 NAV2-201ENST00000349880 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
NACAE9PAV3 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
NACAE9PAV3 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
NACAE9PAV3 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
NACAE9PAV3 AC144522.1-201ENST00000625111 1658 ntBASIC10.2□□□□□ -0.78
NACAE9PAV3 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
NACAE9PAV3 CMTR2-202ENST00000434935 4104 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
NACAE9PAV3 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
NACAE9PAV3 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC10.2□□□□□ -0.78
NACAE9PAV3 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms