Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
DNMT3AQ9Y6K1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.88■■□□□ 1.09
DNMT3AQ9Y6K1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
DNMT3AQ9Y6K1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DNMT3AQ9Y6K1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
DNMT3AQ9Y6K1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.88■■□□□ 1.09
DNMT3AQ9Y6K1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
DNMT3AQ9Y6K1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.88■■□□□ 1.09
DNMT3AQ9Y6K1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.88■■□□□ 1.09
DNMT3AQ9Y6K1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.88■■□□□ 1.09
DNMT3AQ9Y6K1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.88■■□□□ 1.09
DNMT3AQ9Y6K1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DNMT3AQ9Y6K1 AL353803.4-201ENST00000565882 1934 ntBASIC21.88■■□□□ 1.09
DNMT3AQ9Y6K1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
DNMT3AQ9Y6K1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
DNMT3AQ9Y6K1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DNMT3AQ9Y6K1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.88■■□□□ 1.09
DNMT3AQ9Y6K1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.88■■□□□ 1.09
DNMT3AQ9Y6K1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DNMT3AQ9Y6K1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.87■■□□□ 1.09
DNMT3AQ9Y6K1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.87■■□□□ 1.09
DNMT3AQ9Y6K1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
DNMT3AQ9Y6K1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.87■■□□□ 1.09
DNMT3AQ9Y6K1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.87■■□□□ 1.09
DNMT3AQ9Y6K1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.87■■□□□ 1.09
DNMT3AQ9Y6K1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DNMT3AQ9Y6K1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DNMT3AQ9Y6K1 EDA-201ENST00000338901 1233 ntBASIC21.87■■□□□ 1.09
DNMT3AQ9Y6K1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.87■■□□□ 1.09
DNMT3AQ9Y6K1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.87■■□□□ 1.09
DNMT3AQ9Y6K1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DNMT3AQ9Y6K1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DNMT3AQ9Y6K1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
DNMT3AQ9Y6K1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
DNMT3AQ9Y6K1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
DNMT3AQ9Y6K1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
DNMT3AQ9Y6K1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.86■■□□□ 1.09
DNMT3AQ9Y6K1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
DNMT3AQ9Y6K1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
DNMT3AQ9Y6K1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
DNMT3AQ9Y6K1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
DNMT3AQ9Y6K1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
DNMT3AQ9Y6K1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
DNMT3AQ9Y6K1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.86■■□□□ 1.09
DNMT3AQ9Y6K1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
DNMT3AQ9Y6K1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
DNMT3AQ9Y6K1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
DNMT3AQ9Y6K1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.85■■□□□ 1.09
DNMT3AQ9Y6K1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.85■■□□□ 1.09
DNMT3AQ9Y6K1 MIR638-201ENST00000385237 100 ntBASIC21.85■■□□□ 1.09
DNMT3AQ9Y6K1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
DNMT3AQ9Y6K1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DNMT3AQ9Y6K1 AC133637.1-201ENST00000624115 1537 ntBASIC21.85■■□□□ 1.09
DNMT3AQ9Y6K1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DNMT3AQ9Y6K1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
DNMT3AQ9Y6K1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
DNMT3AQ9Y6K1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DNMT3AQ9Y6K1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DNMT3AQ9Y6K1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
DNMT3AQ9Y6K1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DNMT3AQ9Y6K1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.84■■□□□ 1.09
DNMT3AQ9Y6K1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.84■■□□□ 1.09
DNMT3AQ9Y6K1 AL355001.2-201ENST00000620617 1191 ntBASIC21.84■■□□□ 1.09
DNMT3AQ9Y6K1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.84■■□□□ 1.09
DNMT3AQ9Y6K1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.84■■□□□ 1.09
DNMT3AQ9Y6K1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
DNMT3AQ9Y6K1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
DNMT3AQ9Y6K1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.83■■□□□ 1.09
DNMT3AQ9Y6K1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.83■■□□□ 1.09
DNMT3AQ9Y6K1 AC005837.3-201ENST00000612163 286 ntBASIC21.83■■□□□ 1.09
DNMT3AQ9Y6K1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
DNMT3AQ9Y6K1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.83■■□□□ 1.08
DNMT3AQ9Y6K1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DNMT3AQ9Y6K1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DNMT3AQ9Y6K1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.82■■□□□ 1.08
DNMT3AQ9Y6K1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DNMT3AQ9Y6K1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
DNMT3AQ9Y6K1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.82■■□□□ 1.08
DNMT3AQ9Y6K1 MIR4767-201ENST00000582827 78 ntBASIC21.82■■□□□ 1.08
DNMT3AQ9Y6K1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.82■■□□□ 1.08
DNMT3AQ9Y6K1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.82■■□□□ 1.08
DNMT3AQ9Y6K1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.82■■□□□ 1.08
DNMT3AQ9Y6K1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
DNMT3AQ9Y6K1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
DNMT3AQ9Y6K1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.82■■□□□ 1.08
DNMT3AQ9Y6K1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DNMT3AQ9Y6K1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
DNMT3AQ9Y6K1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DNMT3AQ9Y6K1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DNMT3AQ9Y6K1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DNMT3AQ9Y6K1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.81■■□□□ 1.08
DNMT3AQ9Y6K1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
DNMT3AQ9Y6K1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.81■■□□□ 1.08
DNMT3AQ9Y6K1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DNMT3AQ9Y6K1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DNMT3AQ9Y6K1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DNMT3AQ9Y6K1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
DNMT3AQ9Y6K1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
DNMT3AQ9Y6K1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
DNMT3AQ9Y6K1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms