Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
USP16Q9Y5T5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
USP16Q9Y5T5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC28.7■■■□□ 2.18
USP16Q9Y5T5 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC28.7■■■□□ 2.18
USP16Q9Y5T5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
USP16Q9Y5T5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
USP16Q9Y5T5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC28.69■■■□□ 2.18
USP16Q9Y5T5 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC28.69■■■□□ 2.18
USP16Q9Y5T5 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
USP16Q9Y5T5 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
USP16Q9Y5T5 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC28.69■■■□□ 2.18
USP16Q9Y5T5 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC28.69■■■□□ 2.18
USP16Q9Y5T5 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
USP16Q9Y5T5 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
USP16Q9Y5T5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC28.69■■■□□ 2.18
USP16Q9Y5T5 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC28.69■■■□□ 2.18
USP16Q9Y5T5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC28.68■■■□□ 2.18
USP16Q9Y5T5 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
USP16Q9Y5T5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
USP16Q9Y5T5 MIR572-201ENST00000384983 95 ntBASIC28.68■■■□□ 2.18
USP16Q9Y5T5 AICDA-202ENST00000537228 667 ntTSL 5 BASIC28.68■■■□□ 2.18
USP16Q9Y5T5 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC28.68■■■□□ 2.18
USP16Q9Y5T5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
USP16Q9Y5T5 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
USP16Q9Y5T5 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC28.68■■■□□ 2.18
USP16Q9Y5T5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
USP16Q9Y5T5 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC28.68■■■□□ 2.18
USP16Q9Y5T5 LINC01529-204ENST00000636474 1715 ntBASIC28.67■■■□□ 2.18
USP16Q9Y5T5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
USP16Q9Y5T5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
USP16Q9Y5T5 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC28.67■■■□□ 2.18
USP16Q9Y5T5 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC28.67■■■□□ 2.18
USP16Q9Y5T5 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
USP16Q9Y5T5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
USP16Q9Y5T5 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
USP16Q9Y5T5 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
USP16Q9Y5T5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC28.66■■■□□ 2.18
USP16Q9Y5T5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC28.66■■■□□ 2.18
USP16Q9Y5T5 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
USP16Q9Y5T5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
USP16Q9Y5T5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC28.66■■■□□ 2.18
USP16Q9Y5T5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
USP16Q9Y5T5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC28.66■■■□□ 2.18
USP16Q9Y5T5 MIR6084-201ENST00000622012 110 ntBASIC28.66■■■□□ 2.18
USP16Q9Y5T5 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
USP16Q9Y5T5 AC004812.2-201ENST00000611079 2094 ntBASIC28.66■■■□□ 2.18
USP16Q9Y5T5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
USP16Q9Y5T5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC28.66■■■□□ 2.18
USP16Q9Y5T5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
USP16Q9Y5T5 NME4-202ENST00000382940 766 ntTSL 3 BASIC28.65■■■□□ 2.18
USP16Q9Y5T5 LINC01124-201ENST00000409786 2117 ntBASIC28.65■■■□□ 2.18
USP16Q9Y5T5 YBX1P1-201ENST00000445822 960 ntBASIC28.65■■■□□ 2.18
USP16Q9Y5T5 OR2I1P-207ENST00000453522 948 ntBASIC28.65■■■□□ 2.18
USP16Q9Y5T5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC28.65■■■□□ 2.18
USP16Q9Y5T5 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
USP16Q9Y5T5 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
USP16Q9Y5T5 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
USP16Q9Y5T5 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
USP16Q9Y5T5 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
USP16Q9Y5T5 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
USP16Q9Y5T5 AC034268.1-201ENST00000441047 882 ntBASIC28.64■■■□□ 2.18
USP16Q9Y5T5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC28.64■■■□□ 2.18
USP16Q9Y5T5 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
USP16Q9Y5T5 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC28.64■■■□□ 2.18
USP16Q9Y5T5 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.18
USP16Q9Y5T5 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
USP16Q9Y5T5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.17
USP16Q9Y5T5 LINC00543-201ENST00000567234 1845 ntBASIC28.64■■■□□ 2.17
USP16Q9Y5T5 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
USP16Q9Y5T5 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
USP16Q9Y5T5 DUX4L2-201ENST00000561772 1275 ntBASIC28.63■■■□□ 2.17
USP16Q9Y5T5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC28.63■■■□□ 2.17
USP16Q9Y5T5 DUX4L6-201ENST00000626483 1275 ntBASIC28.63■■■□□ 2.17
USP16Q9Y5T5 DUX4L1-201ENST00000627662 1275 ntBASIC28.63■■■□□ 2.17
USP16Q9Y5T5 DUX4L8-201ENST00000629013 1275 ntBASIC28.63■■■□□ 2.17
USP16Q9Y5T5 DUX4L3-201ENST00000630187 1275 ntBASIC28.63■■■□□ 2.17
USP16Q9Y5T5 DUX4L7-201ENST00000630678 1275 ntBASIC28.63■■■□□ 2.17
USP16Q9Y5T5 DUX4L5-201ENST00000630834 1275 ntBASIC28.63■■■□□ 2.17
USP16Q9Y5T5 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC28.63■■■□□ 2.17
USP16Q9Y5T5 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC28.63■■■□□ 2.17
USP16Q9Y5T5 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
USP16Q9Y5T5 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
USP16Q9Y5T5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
USP16Q9Y5T5 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
USP16Q9Y5T5 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
USP16Q9Y5T5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
USP16Q9Y5T5 RAB43-208ENST00000615093 783 ntTSL 5 BASIC28.62■■■□□ 2.17
USP16Q9Y5T5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
USP16Q9Y5T5 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC28.62■■■□□ 2.17
USP16Q9Y5T5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC28.61■■■□□ 2.17
USP16Q9Y5T5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
USP16Q9Y5T5 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC28.61■■■□□ 2.17
USP16Q9Y5T5 AC027612.3-201ENST00000413684 1047 ntBASIC28.61■■■□□ 2.17
USP16Q9Y5T5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
USP16Q9Y5T5 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
USP16Q9Y5T5 AL358852.1-201ENST00000623174 1268 ntBASIC28.61■■■□□ 2.17
USP16Q9Y5T5 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
USP16Q9Y5T5 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
USP16Q9Y5T5 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
USP16Q9Y5T5 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms