Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.55■□□□□ 0.88
HRH3Q9Y5N1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HRH3Q9Y5N1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HRH3Q9Y5N1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.55■□□□□ 0.88
HRH3Q9Y5N1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HRH3Q9Y5N1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HRH3Q9Y5N1 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HRH3Q9Y5N1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HRH3Q9Y5N1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HRH3Q9Y5N1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
HRH3Q9Y5N1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HRH3Q9Y5N1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HRH3Q9Y5N1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HRH3Q9Y5N1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HRH3Q9Y5N1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HRH3Q9Y5N1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HRH3Q9Y5N1 AC006455.2-201ENST00000429931 906 ntBASIC20.54■□□□□ 0.88
HRH3Q9Y5N1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.54■□□□□ 0.88
HRH3Q9Y5N1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.54■□□□□ 0.88
HRH3Q9Y5N1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.54■□□□□ 0.88
HRH3Q9Y5N1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.54■□□□□ 0.88
HRH3Q9Y5N1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HRH3Q9Y5N1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HRH3Q9Y5N1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HRH3Q9Y5N1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.53■□□□□ 0.88
HRH3Q9Y5N1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HRH3Q9Y5N1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HRH3Q9Y5N1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.53■□□□□ 0.88
HRH3Q9Y5N1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.53■□□□□ 0.88
HRH3Q9Y5N1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HRH3Q9Y5N1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
HRH3Q9Y5N1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HRH3Q9Y5N1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HRH3Q9Y5N1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HRH3Q9Y5N1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HRH3Q9Y5N1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
HRH3Q9Y5N1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.52■□□□□ 0.88
HRH3Q9Y5N1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HRH3Q9Y5N1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HRH3Q9Y5N1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HRH3Q9Y5N1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HRH3Q9Y5N1 EDA-201ENST00000338901 1233 ntBASIC20.52■□□□□ 0.88
HRH3Q9Y5N1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
HRH3Q9Y5N1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
HRH3Q9Y5N1 AL355001.2-201ENST00000620617 1191 ntBASIC20.52■□□□□ 0.88
HRH3Q9Y5N1 AL136967.2-201ENST00000623968 743 ntBASIC20.52■□□□□ 0.88
HRH3Q9Y5N1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HRH3Q9Y5N1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HRH3Q9Y5N1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HRH3Q9Y5N1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
HRH3Q9Y5N1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
HRH3Q9Y5N1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
HRH3Q9Y5N1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HRH3Q9Y5N1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HRH3Q9Y5N1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HRH3Q9Y5N1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
HRH3Q9Y5N1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
HRH3Q9Y5N1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HRH3Q9Y5N1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.51■□□□□ 0.87
HRH3Q9Y5N1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HRH3Q9Y5N1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.51■□□□□ 0.87
HRH3Q9Y5N1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.51■□□□□ 0.87
HRH3Q9Y5N1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
HRH3Q9Y5N1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.5■□□□□ 0.87
HRH3Q9Y5N1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HRH3Q9Y5N1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HRH3Q9Y5N1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HRH3Q9Y5N1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.5■□□□□ 0.87
HRH3Q9Y5N1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
HRH3Q9Y5N1 AC099791.2-201ENST00000605725 427 ntBASIC20.5■□□□□ 0.87
HRH3Q9Y5N1 AC012676.1-201ENST00000574705 1949 ntBASIC20.5■□□□□ 0.87
HRH3Q9Y5N1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HRH3Q9Y5N1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HRH3Q9Y5N1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HRH3Q9Y5N1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
HRH3Q9Y5N1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
HRH3Q9Y5N1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
HRH3Q9Y5N1 AC079630.1-202ENST00000618127 1840 ntBASIC20.49■□□□□ 0.87
HRH3Q9Y5N1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HRH3Q9Y5N1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HRH3Q9Y5N1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.49■□□□□ 0.87
HRH3Q9Y5N1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HRH3Q9Y5N1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
HRH3Q9Y5N1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HRH3Q9Y5N1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HRH3Q9Y5N1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HRH3Q9Y5N1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HRH3Q9Y5N1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HRH3Q9Y5N1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HRH3Q9Y5N1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HRH3Q9Y5N1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.48■□□□□ 0.87
HRH3Q9Y5N1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HRH3Q9Y5N1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HRH3Q9Y5N1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
HRH3Q9Y5N1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HRH3Q9Y5N1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HRH3Q9Y5N1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
HRH3Q9Y5N1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.47■□□□□ 0.87
HRH3Q9Y5N1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HRH3Q9Y5N1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms