Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.58■□□□□ 0.4
SMCO4Q9NRQ5 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SMCO4Q9NRQ5 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.58■□□□□ 0.4
SMCO4Q9NRQ5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SMCO4Q9NRQ5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SMCO4Q9NRQ5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMCO4Q9NRQ5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMCO4Q9NRQ5 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SMCO4Q9NRQ5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
SMCO4Q9NRQ5 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMCO4Q9NRQ5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
SMCO4Q9NRQ5 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.57■□□□□ 0.4
SMCO4Q9NRQ5 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMCO4Q9NRQ5 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.57■□□□□ 0.4
SMCO4Q9NRQ5 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SMCO4Q9NRQ5 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMCO4Q9NRQ5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMCO4Q9NRQ5 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMCO4Q9NRQ5 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMCO4Q9NRQ5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMCO4Q9NRQ5 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMCO4Q9NRQ5 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMCO4Q9NRQ5 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMCO4Q9NRQ5 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMCO4Q9NRQ5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.56■□□□□ 0.4
SMCO4Q9NRQ5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMCO4Q9NRQ5 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SMCO4Q9NRQ5 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.56■□□□□ 0.4
SMCO4Q9NRQ5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMCO4Q9NRQ5 AL157384.1-201ENST00000445995 2473 ntBASIC17.56■□□□□ 0.4
SMCO4Q9NRQ5 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMCO4Q9NRQ5 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMCO4Q9NRQ5 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SMCO4Q9NRQ5 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMCO4Q9NRQ5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SMCO4Q9NRQ5 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMCO4Q9NRQ5 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SMCO4Q9NRQ5 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
SMCO4Q9NRQ5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMCO4Q9NRQ5 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMCO4Q9NRQ5 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.55■□□□□ 0.4
SMCO4Q9NRQ5 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMCO4Q9NRQ5 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
SMCO4Q9NRQ5 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SMCO4Q9NRQ5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
SMCO4Q9NRQ5 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMCO4Q9NRQ5 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMCO4Q9NRQ5 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMCO4Q9NRQ5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMCO4Q9NRQ5 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SMCO4Q9NRQ5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.55■□□□□ 0.4
SMCO4Q9NRQ5 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMCO4Q9NRQ5 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMCO4Q9NRQ5 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMCO4Q9NRQ5 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.54■□□□□ 0.4
SMCO4Q9NRQ5 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMCO4Q9NRQ5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMCO4Q9NRQ5 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC17.54■□□□□ 0.4
SMCO4Q9NRQ5 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC17.54■□□□□ 0.4
SMCO4Q9NRQ5 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.54■□□□□ 0.4
SMCO4Q9NRQ5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.54■□□□□ 0.4
SMCO4Q9NRQ5 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SMCO4Q9NRQ5 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.54■□□□□ 0.4
SMCO4Q9NRQ5 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.54■□□□□ 0.4
SMCO4Q9NRQ5 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMCO4Q9NRQ5 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMCO4Q9NRQ5 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMCO4Q9NRQ5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMCO4Q9NRQ5 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMCO4Q9NRQ5 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMCO4Q9NRQ5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMCO4Q9NRQ5 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMCO4Q9NRQ5 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMCO4Q9NRQ5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMCO4Q9NRQ5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMCO4Q9NRQ5 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
SMCO4Q9NRQ5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMCO4Q9NRQ5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.52■□□□□ 0.4
SMCO4Q9NRQ5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.52■□□□□ 0.4
SMCO4Q9NRQ5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.52■□□□□ 0.4
SMCO4Q9NRQ5 KLF16-203ENST00000592313 508 ntTSL 3 BASIC17.52■□□□□ 0.4
SMCO4Q9NRQ5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.52■□□□□ 0.4
SMCO4Q9NRQ5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
SMCO4Q9NRQ5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMCO4Q9NRQ5 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMCO4Q9NRQ5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMCO4Q9NRQ5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.39
SMCO4Q9NRQ5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.52■□□□□ 0.39
SMCO4Q9NRQ5 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMCO4Q9NRQ5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMCO4Q9NRQ5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMCO4Q9NRQ5 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMCO4Q9NRQ5 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMCO4Q9NRQ5 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.51■□□□□ 0.39
SMCO4Q9NRQ5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SMCO4Q9NRQ5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SMCO4Q9NRQ5 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SMCO4Q9NRQ5 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SMCO4Q9NRQ5 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMCO4Q9NRQ5 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms