Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SDHAF3Q9NRP4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SDHAF3Q9NRP4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SDHAF3Q9NRP4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.4■□□□□ 0.86
SDHAF3Q9NRP4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SDHAF3Q9NRP4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.4■□□□□ 0.86
SDHAF3Q9NRP4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SDHAF3Q9NRP4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
SDHAF3Q9NRP4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.39■□□□□ 0.86
SDHAF3Q9NRP4 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.39■□□□□ 0.86
SDHAF3Q9NRP4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SDHAF3Q9NRP4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.39■□□□□ 0.86
SDHAF3Q9NRP4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
SDHAF3Q9NRP4 SYT6-210ENST00000641643 1587 ntBASIC20.39■□□□□ 0.85
SDHAF3Q9NRP4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.39■□□□□ 0.85
SDHAF3Q9NRP4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SDHAF3Q9NRP4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SDHAF3Q9NRP4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.39■□□□□ 0.85
SDHAF3Q9NRP4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SDHAF3Q9NRP4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.39■□□□□ 0.85
SDHAF3Q9NRP4 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.39■□□□□ 0.85
SDHAF3Q9NRP4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SDHAF3Q9NRP4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SDHAF3Q9NRP4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.39■□□□□ 0.85
SDHAF3Q9NRP4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SDHAF3Q9NRP4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SDHAF3Q9NRP4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDHAF3Q9NRP4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDHAF3Q9NRP4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.38■□□□□ 0.85
SDHAF3Q9NRP4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDHAF3Q9NRP4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDHAF3Q9NRP4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.38■□□□□ 0.85
SDHAF3Q9NRP4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDHAF3Q9NRP4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SDHAF3Q9NRP4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.38■□□□□ 0.85
SDHAF3Q9NRP4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SDHAF3Q9NRP4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SDHAF3Q9NRP4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
SDHAF3Q9NRP4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SDHAF3Q9NRP4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.38■□□□□ 0.85
SDHAF3Q9NRP4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SDHAF3Q9NRP4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.38■□□□□ 0.85
SDHAF3Q9NRP4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDHAF3Q9NRP4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDHAF3Q9NRP4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SDHAF3Q9NRP4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.37■□□□□ 0.85
SDHAF3Q9NRP4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SDHAF3Q9NRP4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SDHAF3Q9NRP4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SDHAF3Q9NRP4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.37■□□□□ 0.85
SDHAF3Q9NRP4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.37■□□□□ 0.85
SDHAF3Q9NRP4 AL138724.1-201ENST00000606771 1088 ntBASIC20.37■□□□□ 0.85
SDHAF3Q9NRP4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SDHAF3Q9NRP4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SDHAF3Q9NRP4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.37■□□□□ 0.85
SDHAF3Q9NRP4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SDHAF3Q9NRP4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SDHAF3Q9NRP4 AL353803.4-201ENST00000565882 1934 ntBASIC20.37■□□□□ 0.85
SDHAF3Q9NRP4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SDHAF3Q9NRP4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SDHAF3Q9NRP4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SDHAF3Q9NRP4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SDHAF3Q9NRP4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SDHAF3Q9NRP4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SDHAF3Q9NRP4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SDHAF3Q9NRP4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SDHAF3Q9NRP4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.36■□□□□ 0.85
SDHAF3Q9NRP4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.36■□□□□ 0.85
SDHAF3Q9NRP4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.36■□□□□ 0.85
SDHAF3Q9NRP4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SDHAF3Q9NRP4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.36■□□□□ 0.85
SDHAF3Q9NRP4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.36■□□□□ 0.85
SDHAF3Q9NRP4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SDHAF3Q9NRP4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SDHAF3Q9NRP4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SDHAF3Q9NRP4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.35■□□□□ 0.85
SDHAF3Q9NRP4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.35■□□□□ 0.85
SDHAF3Q9NRP4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.35■□□□□ 0.85
SDHAF3Q9NRP4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SDHAF3Q9NRP4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SDHAF3Q9NRP4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
SDHAF3Q9NRP4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SDHAF3Q9NRP4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.35■□□□□ 0.85
SDHAF3Q9NRP4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SDHAF3Q9NRP4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SDHAF3Q9NRP4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SDHAF3Q9NRP4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.34■□□□□ 0.85
SDHAF3Q9NRP4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.34■□□□□ 0.85
SDHAF3Q9NRP4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.34■□□□□ 0.85
SDHAF3Q9NRP4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SDHAF3Q9NRP4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SDHAF3Q9NRP4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SDHAF3Q9NRP4 pRNA.6-201ENST00000610482 90 ntBASIC20.34■□□□□ 0.85
SDHAF3Q9NRP4 pRNA.5-201ENST00000612139 90 ntBASIC20.34■□□□□ 0.85
SDHAF3Q9NRP4 pRNA.11-201ENST00000618423 90 ntBASIC20.34■□□□□ 0.85
SDHAF3Q9NRP4 pRNA.13-201ENST00000619112 90 ntBASIC20.34■□□□□ 0.85
SDHAF3Q9NRP4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.34■□□□□ 0.85
SDHAF3Q9NRP4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.34■□□□□ 0.85
SDHAF3Q9NRP4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.34■□□□□ 0.85
SDHAF3Q9NRP4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms