Protein–RNA interactions for Protein: Q9H7V2

SYNDIG1, Synapse differentiation-inducing gene protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1Q9H7V2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SYNDIG1Q9H7V2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.74■■□□□ 1.07
SYNDIG1Q9H7V2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.74■■□□□ 1.07
SYNDIG1Q9H7V2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYNDIG1Q9H7V2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.74■■□□□ 1.07
SYNDIG1Q9H7V2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.73■■□□□ 1.07
SYNDIG1Q9H7V2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNDIG1Q9H7V2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNDIG1Q9H7V2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNDIG1Q9H7V2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.73■■□□□ 1.07
SYNDIG1Q9H7V2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.73■■□□□ 1.07
SYNDIG1Q9H7V2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNDIG1Q9H7V2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.73■■□□□ 1.07
SYNDIG1Q9H7V2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNDIG1Q9H7V2 AC022211.4-201ENST00000625094 2161 ntBASIC21.72■■□□□ 1.07
SYNDIG1Q9H7V2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.72■■□□□ 1.07
SYNDIG1Q9H7V2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.72■■□□□ 1.07
SYNDIG1Q9H7V2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNDIG1Q9H7V2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNDIG1Q9H7V2 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.72■■□□□ 1.07
SYNDIG1Q9H7V2 SLC47A1P1-202ENST00000449666 945 ntBASIC21.72■■□□□ 1.07
SYNDIG1Q9H7V2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.72■■□□□ 1.07
SYNDIG1Q9H7V2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.72■■□□□ 1.07
SYNDIG1Q9H7V2 AC141586.4-201ENST00000624558 1573 ntBASIC21.72■■□□□ 1.07
SYNDIG1Q9H7V2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SYNDIG1Q9H7V2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SYNDIG1Q9H7V2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.72■■□□□ 1.07
SYNDIG1Q9H7V2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNDIG1Q9H7V2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
SYNDIG1Q9H7V2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.71■■□□□ 1.07
SYNDIG1Q9H7V2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYNDIG1Q9H7V2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYNDIG1Q9H7V2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.71■■□□□ 1.07
SYNDIG1Q9H7V2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.71■■□□□ 1.07
SYNDIG1Q9H7V2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.71■■□□□ 1.07
SYNDIG1Q9H7V2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYNDIG1Q9H7V2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.71■■□□□ 1.07
SYNDIG1Q9H7V2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SYNDIG1Q9H7V2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.7■■□□□ 1.06
SYNDIG1Q9H7V2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.7■■□□□ 1.06
SYNDIG1Q9H7V2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.7■■□□□ 1.06
SYNDIG1Q9H7V2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SYNDIG1Q9H7V2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.7■■□□□ 1.06
SYNDIG1Q9H7V2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.7■■□□□ 1.06
SYNDIG1Q9H7V2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
SYNDIG1Q9H7V2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SYNDIG1Q9H7V2 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.69■■□□□ 1.06
SYNDIG1Q9H7V2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
SYNDIG1Q9H7V2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SYNDIG1Q9H7V2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SYNDIG1Q9H7V2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SYNDIG1Q9H7V2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SYNDIG1Q9H7V2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SYNDIG1Q9H7V2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.68■■□□□ 1.06
SYNDIG1Q9H7V2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.68■■□□□ 1.06
SYNDIG1Q9H7V2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
SYNDIG1Q9H7V2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.67■■□□□ 1.06
SYNDIG1Q9H7V2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SYNDIG1Q9H7V2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SYNDIG1Q9H7V2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SYNDIG1Q9H7V2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SYNDIG1Q9H7V2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SYNDIG1Q9H7V2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYNDIG1Q9H7V2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.66■■□□□ 1.06
SYNDIG1Q9H7V2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYNDIG1Q9H7V2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
SYNDIG1Q9H7V2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYNDIG1Q9H7V2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.66■■□□□ 1.06
SYNDIG1Q9H7V2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.66■■□□□ 1.06
SYNDIG1Q9H7V2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.66■■□□□ 1.06
SYNDIG1Q9H7V2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYNDIG1Q9H7V2 AC012676.1-201ENST00000574705 1949 ntBASIC21.66■■□□□ 1.06
SYNDIG1Q9H7V2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYNDIG1Q9H7V2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SYNDIG1Q9H7V2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYNDIG1Q9H7V2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYNDIG1Q9H7V2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.66■■□□□ 1.06
SYNDIG1Q9H7V2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYNDIG1Q9H7V2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYNDIG1Q9H7V2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.65■■□□□ 1.06
SYNDIG1Q9H7V2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYNDIG1Q9H7V2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SYNDIG1Q9H7V2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.65■■□□□ 1.06
SYNDIG1Q9H7V2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYNDIG1Q9H7V2 MIR6084-201ENST00000622012 110 ntBASIC21.65■■□□□ 1.06
SYNDIG1Q9H7V2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SYNDIG1Q9H7V2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SYNDIG1Q9H7V2 AP003733.4-201ENST00000623785 1697 ntBASIC21.65■■□□□ 1.06
SYNDIG1Q9H7V2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SYNDIG1Q9H7V2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SYNDIG1Q9H7V2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SYNDIG1Q9H7V2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SYNDIG1Q9H7V2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SYNDIG1Q9H7V2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SYNDIG1Q9H7V2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SYNDIG1Q9H7V2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
SYNDIG1Q9H7V2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SYNDIG1Q9H7V2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
SYNDIG1Q9H7V2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SYNDIG1Q9H7V2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms