Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.33■■□□□ 1.33
NECTIN4Q96NY8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
NECTIN4Q96NY8 RAP2CP1-201ENST00000605103 478 ntBASIC23.33■■□□□ 1.33
NECTIN4Q96NY8 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.33■■□□□ 1.33
NECTIN4Q96NY8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.32■■□□□ 1.32
NECTIN4Q96NY8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NECTIN4Q96NY8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.32■■□□□ 1.32
NECTIN4Q96NY8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.32■■□□□ 1.32
NECTIN4Q96NY8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.32■■□□□ 1.32
NECTIN4Q96NY8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.32■■□□□ 1.32
NECTIN4Q96NY8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.32■■□□□ 1.32
NECTIN4Q96NY8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NECTIN4Q96NY8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.32■■□□□ 1.32
NECTIN4Q96NY8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.32■■□□□ 1.32
NECTIN4Q96NY8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NECTIN4Q96NY8 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.31■■□□□ 1.32
NECTIN4Q96NY8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.31■■□□□ 1.32
NECTIN4Q96NY8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NECTIN4Q96NY8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.31■■□□□ 1.32
NECTIN4Q96NY8 DUX4L4-201ENST00000566884 1269 ntBASIC23.31■■□□□ 1.32
NECTIN4Q96NY8 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.31■■□□□ 1.32
NECTIN4Q96NY8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
NECTIN4Q96NY8 DUSP8P4-201ENST00000399538 1761 ntBASIC23.31■■□□□ 1.32
NECTIN4Q96NY8 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NECTIN4Q96NY8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NECTIN4Q96NY8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
NECTIN4Q96NY8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NECTIN4Q96NY8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NECTIN4Q96NY8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
NECTIN4Q96NY8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NECTIN4Q96NY8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.3■■□□□ 1.32
NECTIN4Q96NY8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
NECTIN4Q96NY8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NECTIN4Q96NY8 CDCA4P2-201ENST00000441182 718 ntBASIC23.3■■□□□ 1.32
NECTIN4Q96NY8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.3■■□□□ 1.32
NECTIN4Q96NY8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NECTIN4Q96NY8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.3■■□□□ 1.32
NECTIN4Q96NY8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.3■■□□□ 1.32
NECTIN4Q96NY8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.3■■□□□ 1.32
NECTIN4Q96NY8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.3■■□□□ 1.32
NECTIN4Q96NY8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NECTIN4Q96NY8 AC073111.5-205ENST00000641717 521 ntBASIC23.3■■□□□ 1.32
NECTIN4Q96NY8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NECTIN4Q96NY8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NECTIN4Q96NY8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NECTIN4Q96NY8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NECTIN4Q96NY8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NECTIN4Q96NY8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.29■■□□□ 1.32
NECTIN4Q96NY8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NECTIN4Q96NY8 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NECTIN4Q96NY8 AC026185.1-201ENST00000445748 174 ntBASIC23.29■■□□□ 1.32
NECTIN4Q96NY8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.29■■□□□ 1.32
NECTIN4Q96NY8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
NECTIN4Q96NY8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.28■■□□□ 1.32
NECTIN4Q96NY8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
NECTIN4Q96NY8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NECTIN4Q96NY8 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NECTIN4Q96NY8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
NECTIN4Q96NY8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
NECTIN4Q96NY8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.28■■□□□ 1.32
NECTIN4Q96NY8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
NECTIN4Q96NY8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
NECTIN4Q96NY8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.28■■□□□ 1.32
NECTIN4Q96NY8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.28■■□□□ 1.32
NECTIN4Q96NY8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.28■■□□□ 1.32
NECTIN4Q96NY8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NECTIN4Q96NY8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NECTIN4Q96NY8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NECTIN4Q96NY8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
NECTIN4Q96NY8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NECTIN4Q96NY8 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NECTIN4Q96NY8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NECTIN4Q96NY8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.27■■□□□ 1.32
NECTIN4Q96NY8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NECTIN4Q96NY8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.27■■□□□ 1.32
NECTIN4Q96NY8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.27■■□□□ 1.32
NECTIN4Q96NY8 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NECTIN4Q96NY8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.27■■□□□ 1.32
NECTIN4Q96NY8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
NECTIN4Q96NY8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NECTIN4Q96NY8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
NECTIN4Q96NY8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.26■■□□□ 1.31
NECTIN4Q96NY8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NECTIN4Q96NY8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.26■■□□□ 1.31
NECTIN4Q96NY8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.26■■□□□ 1.31
NECTIN4Q96NY8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.26■■□□□ 1.31
NECTIN4Q96NY8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.26■■□□□ 1.31
NECTIN4Q96NY8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NECTIN4Q96NY8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.26■■□□□ 1.31
NECTIN4Q96NY8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.26■■□□□ 1.31
NECTIN4Q96NY8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NECTIN4Q96NY8 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NECTIN4Q96NY8 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
NECTIN4Q96NY8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
NECTIN4Q96NY8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.25■■□□□ 1.31
NECTIN4Q96NY8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NECTIN4Q96NY8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.25■■□□□ 1.31
NECTIN4Q96NY8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
NECTIN4Q96NY8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.25■■□□□ 1.31
NECTIN4Q96NY8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms