Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
APOBEC3DQ96AK3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
APOBEC3DQ96AK3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
APOBEC3DQ96AK3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
APOBEC3DQ96AK3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
APOBEC3DQ96AK3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
APOBEC3DQ96AK3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
APOBEC3DQ96AK3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.3■□□□□ 0.68
APOBEC3DQ96AK3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
APOBEC3DQ96AK3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
APOBEC3DQ96AK3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
APOBEC3DQ96AK3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
APOBEC3DQ96AK3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APOBEC3DQ96AK3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
APOBEC3DQ96AK3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
APOBEC3DQ96AK3 DUX4L4-201ENST00000566884 1269 ntBASIC19.29■□□□□ 0.68
APOBEC3DQ96AK3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.29■□□□□ 0.68
APOBEC3DQ96AK3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APOBEC3DQ96AK3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.29■□□□□ 0.68
APOBEC3DQ96AK3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.29■□□□□ 0.68
APOBEC3DQ96AK3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.29■□□□□ 0.68
APOBEC3DQ96AK3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APOBEC3DQ96AK3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.29■□□□□ 0.68
APOBEC3DQ96AK3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APOBEC3DQ96AK3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.29■□□□□ 0.68
APOBEC3DQ96AK3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
APOBEC3DQ96AK3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
APOBEC3DQ96AK3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.28■□□□□ 0.68
APOBEC3DQ96AK3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
APOBEC3DQ96AK3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.28■□□□□ 0.68
APOBEC3DQ96AK3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.28■□□□□ 0.68
APOBEC3DQ96AK3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.28■□□□□ 0.68
APOBEC3DQ96AK3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APOBEC3DQ96AK3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APOBEC3DQ96AK3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
APOBEC3DQ96AK3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APOBEC3DQ96AK3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.27■□□□□ 0.68
APOBEC3DQ96AK3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
APOBEC3DQ96AK3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APOBEC3DQ96AK3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
APOBEC3DQ96AK3 AC241377.3-202ENST00000626088 1088 ntBASIC19.27■□□□□ 0.68
APOBEC3DQ96AK3 AC241585.3-202ENST00000628937 1088 ntBASIC19.27■□□□□ 0.68
APOBEC3DQ96AK3 AC245100.8-202ENST00000629247 1058 ntBASIC19.27■□□□□ 0.68
APOBEC3DQ96AK3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APOBEC3DQ96AK3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
APOBEC3DQ96AK3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOBEC3DQ96AK3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.26■□□□□ 0.67
APOBEC3DQ96AK3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.26■□□□□ 0.67
APOBEC3DQ96AK3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
APOBEC3DQ96AK3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.26■□□□□ 0.67
APOBEC3DQ96AK3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
APOBEC3DQ96AK3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOBEC3DQ96AK3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOBEC3DQ96AK3 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.26■□□□□ 0.67
APOBEC3DQ96AK3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.26■□□□□ 0.67
APOBEC3DQ96AK3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.26■□□□□ 0.67
APOBEC3DQ96AK3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
APOBEC3DQ96AK3 AC068473.5-201ENST00000616428 2072 ntBASIC19.26■□□□□ 0.67
APOBEC3DQ96AK3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
APOBEC3DQ96AK3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
APOBEC3DQ96AK3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOBEC3DQ96AK3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.25■□□□□ 0.67
APOBEC3DQ96AK3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOBEC3DQ96AK3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.25■□□□□ 0.67
APOBEC3DQ96AK3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.25■□□□□ 0.67
APOBEC3DQ96AK3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOBEC3DQ96AK3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.25■□□□□ 0.67
APOBEC3DQ96AK3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.24■□□□□ 0.67
APOBEC3DQ96AK3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOBEC3DQ96AK3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
APOBEC3DQ96AK3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.24■□□□□ 0.67
APOBEC3DQ96AK3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
APOBEC3DQ96AK3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOBEC3DQ96AK3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.24■□□□□ 0.67
APOBEC3DQ96AK3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.24■□□□□ 0.67
APOBEC3DQ96AK3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.24■□□□□ 0.67
APOBEC3DQ96AK3 AC009086.3-201ENST00000623486 1008 ntBASIC19.24■□□□□ 0.67
APOBEC3DQ96AK3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOBEC3DQ96AK3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOBEC3DQ96AK3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.24■□□□□ 0.67
APOBEC3DQ96AK3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOBEC3DQ96AK3 C9orf163-202ENST00000624034 2573 ntBASIC19.24■□□□□ 0.67
APOBEC3DQ96AK3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.24■□□□□ 0.67
APOBEC3DQ96AK3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOBEC3DQ96AK3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOBEC3DQ96AK3 AC012676.1-201ENST00000574705 1949 ntBASIC19.23■□□□□ 0.67
APOBEC3DQ96AK3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APOBEC3DQ96AK3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
APOBEC3DQ96AK3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APOBEC3DQ96AK3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APOBEC3DQ96AK3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.23■□□□□ 0.67
APOBEC3DQ96AK3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.23■□□□□ 0.67
APOBEC3DQ96AK3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.23■□□□□ 0.67
APOBEC3DQ96AK3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
APOBEC3DQ96AK3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.23■□□□□ 0.67
APOBEC3DQ96AK3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.23■□□□□ 0.67
APOBEC3DQ96AK3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
APOBEC3DQ96AK3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.22■□□□□ 0.67
APOBEC3DQ96AK3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOBEC3DQ96AK3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms