Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SH3RF2Q8TEC5 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SH3RF2Q8TEC5 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.2■■□□□ 1.3
SH3RF2Q8TEC5 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SH3RF2Q8TEC5 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SH3RF2Q8TEC5 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
SH3RF2Q8TEC5 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SH3RF2Q8TEC5 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.2■■□□□ 1.3
SH3RF2Q8TEC5 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SH3RF2Q8TEC5 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.2■■□□□ 1.3
SH3RF2Q8TEC5 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SH3RF2Q8TEC5 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.2■■□□□ 1.3
SH3RF2Q8TEC5 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SH3RF2Q8TEC5 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SH3RF2Q8TEC5 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.2■■□□□ 1.3
SH3RF2Q8TEC5 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
SH3RF2Q8TEC5 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.2■■□□□ 1.3
SH3RF2Q8TEC5 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SH3RF2Q8TEC5 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SH3RF2Q8TEC5 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.19■■□□□ 1.3
SH3RF2Q8TEC5 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.19■■□□□ 1.3
SH3RF2Q8TEC5 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.19■■□□□ 1.3
SH3RF2Q8TEC5 AL499627.2-201ENST00000606283 725 ntBASIC23.19■■□□□ 1.3
SH3RF2Q8TEC5 AC087623.3-201ENST00000607047 1098 ntBASIC23.19■■□□□ 1.3
SH3RF2Q8TEC5 AC092666.2-201ENST00000613287 246 ntBASIC23.19■■□□□ 1.3
SH3RF2Q8TEC5 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SH3RF2Q8TEC5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SH3RF2Q8TEC5 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SH3RF2Q8TEC5 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
SH3RF2Q8TEC5 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
SH3RF2Q8TEC5 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SH3RF2Q8TEC5 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SH3RF2Q8TEC5 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SH3RF2Q8TEC5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SH3RF2Q8TEC5 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SH3RF2Q8TEC5 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
SH3RF2Q8TEC5 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.18■■□□□ 1.3
SH3RF2Q8TEC5 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.18■■□□□ 1.3
SH3RF2Q8TEC5 DUX4L4-201ENST00000566884 1269 ntBASIC23.18■■□□□ 1.3
SH3RF2Q8TEC5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
SH3RF2Q8TEC5 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SH3RF2Q8TEC5 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SH3RF2Q8TEC5 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SH3RF2Q8TEC5 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SH3RF2Q8TEC5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SH3RF2Q8TEC5 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.17■■□□□ 1.3
SH3RF2Q8TEC5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.17■■□□□ 1.3
SH3RF2Q8TEC5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.17■■□□□ 1.3
SH3RF2Q8TEC5 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SH3RF2Q8TEC5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
SH3RF2Q8TEC5 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
SH3RF2Q8TEC5 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SH3RF2Q8TEC5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.17■■□□□ 1.3
SH3RF2Q8TEC5 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.17■■□□□ 1.3
SH3RF2Q8TEC5 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.17■■□□□ 1.3
SH3RF2Q8TEC5 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.17■■□□□ 1.3
SH3RF2Q8TEC5 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.16■■□□□ 1.3
SH3RF2Q8TEC5 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SH3RF2Q8TEC5 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.16■■□□□ 1.3
SH3RF2Q8TEC5 AC144652.1-201ENST00000609974 1624 ntBASIC23.16■■□□□ 1.3
SH3RF2Q8TEC5 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SH3RF2Q8TEC5 TSPY26P-201ENST00000476365 1326 ntBASIC23.16■■□□□ 1.3
SH3RF2Q8TEC5 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SH3RF2Q8TEC5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
SH3RF2Q8TEC5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
SH3RF2Q8TEC5 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.16■■□□□ 1.3
SH3RF2Q8TEC5 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.16■■□□□ 1.3
SH3RF2Q8TEC5 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.16■■□□□ 1.3
SH3RF2Q8TEC5 LINC00543-201ENST00000567234 1845 ntBASIC23.16■■□□□ 1.3
SH3RF2Q8TEC5 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
SH3RF2Q8TEC5 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.16■■□□□ 1.3
SH3RF2Q8TEC5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SH3RF2Q8TEC5 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.16■■□□□ 1.3
SH3RF2Q8TEC5 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SH3RF2Q8TEC5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SH3RF2Q8TEC5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.16■■□□□ 1.3
SH3RF2Q8TEC5 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SH3RF2Q8TEC5 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SH3RF2Q8TEC5 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SH3RF2Q8TEC5 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.15■■□□□ 1.3
SH3RF2Q8TEC5 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
SH3RF2Q8TEC5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.15■■□□□ 1.3
SH3RF2Q8TEC5 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.15■■□□□ 1.3
SH3RF2Q8TEC5 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
SH3RF2Q8TEC5 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SH3RF2Q8TEC5 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
SH3RF2Q8TEC5 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SH3RF2Q8TEC5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.14■■□□□ 1.3
SH3RF2Q8TEC5 LINC01529-204ENST00000636474 1715 ntBASIC23.14■■□□□ 1.3
SH3RF2Q8TEC5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SH3RF2Q8TEC5 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.14■■□□□ 1.29
SH3RF2Q8TEC5 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.14■■□□□ 1.29
SH3RF2Q8TEC5 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SH3RF2Q8TEC5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.14■■□□□ 1.29
SH3RF2Q8TEC5 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SH3RF2Q8TEC5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SH3RF2Q8TEC5 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.14■■□□□ 1.29
SH3RF2Q8TEC5 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SH3RF2Q8TEC5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SH3RF2Q8TEC5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms