Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST3H2BBQ8N257 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST3H2BBQ8N257 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST3H2BBQ8N257 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.8■□□□□ 0.28
HIST3H2BBQ8N257 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST3H2BBQ8N257 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST3H2BBQ8N257 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HIST3H2BBQ8N257 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
HIST3H2BBQ8N257 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.8■□□□□ 0.28
HIST3H2BBQ8N257 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST3H2BBQ8N257 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
HIST3H2BBQ8N257 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.79■□□□□ 0.28
HIST3H2BBQ8N257 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST3H2BBQ8N257 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST3H2BBQ8N257 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.79■□□□□ 0.28
HIST3H2BBQ8N257 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST3H2BBQ8N257 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST3H2BBQ8N257 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST3H2BBQ8N257 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
HIST3H2BBQ8N257 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
HIST3H2BBQ8N257 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
HIST3H2BBQ8N257 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST3H2BBQ8N257 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
HIST3H2BBQ8N257 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST3H2BBQ8N257 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HIST3H2BBQ8N257 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST3H2BBQ8N257 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.78■□□□□ 0.28
HIST3H2BBQ8N257 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
HIST3H2BBQ8N257 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HIST3H2BBQ8N257 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.78■□□□□ 0.28
HIST3H2BBQ8N257 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST3H2BBQ8N257 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HIST3H2BBQ8N257 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST3H2BBQ8N257 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
HIST3H2BBQ8N257 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST3H2BBQ8N257 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST3H2BBQ8N257 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HIST3H2BBQ8N257 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HIST3H2BBQ8N257 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HIST3H2BBQ8N257 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST3H2BBQ8N257 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST3H2BBQ8N257 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.77■□□□□ 0.28
HIST3H2BBQ8N257 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.77■□□□□ 0.28
HIST3H2BBQ8N257 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HIST3H2BBQ8N257 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HIST3H2BBQ8N257 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HIST3H2BBQ8N257 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HIST3H2BBQ8N257 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC16.77■□□□□ 0.28
HIST3H2BBQ8N257 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HIST3H2BBQ8N257 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
HIST3H2BBQ8N257 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
HIST3H2BBQ8N257 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HIST3H2BBQ8N257 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
HIST3H2BBQ8N257 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HIST3H2BBQ8N257 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HIST3H2BBQ8N257 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HIST3H2BBQ8N257 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HIST3H2BBQ8N257 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
HIST3H2BBQ8N257 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST3H2BBQ8N257 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST3H2BBQ8N257 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST3H2BBQ8N257 AC026471.1-201ENST00000564629 3026 ntBASIC16.76■□□□□ 0.27
HIST3H2BBQ8N257 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST3H2BBQ8N257 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST3H2BBQ8N257 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HIST3H2BBQ8N257 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HIST3H2BBQ8N257 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST3H2BBQ8N257 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HIST3H2BBQ8N257 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC16.76■□□□□ 0.27
HIST3H2BBQ8N257 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST3H2BBQ8N257 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST3H2BBQ8N257 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST3H2BBQ8N257 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST3H2BBQ8N257 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.76■□□□□ 0.27
HIST3H2BBQ8N257 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HIST3H2BBQ8N257 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC16.75■□□□□ 0.27
HIST3H2BBQ8N257 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.75■□□□□ 0.27
HIST3H2BBQ8N257 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HIST3H2BBQ8N257 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST3H2BBQ8N257 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HIST3H2BBQ8N257 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC16.75■□□□□ 0.27
HIST3H2BBQ8N257 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HIST3H2BBQ8N257 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST3H2BBQ8N257 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC16.75■□□□□ 0.27
HIST3H2BBQ8N257 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST3H2BBQ8N257 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST3H2BBQ8N257 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST3H2BBQ8N257 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HIST3H2BBQ8N257 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST3H2BBQ8N257 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.74■□□□□ 0.27
HIST3H2BBQ8N257 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIST3H2BBQ8N257 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.74■□□□□ 0.27
HIST3H2BBQ8N257 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST3H2BBQ8N257 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST3H2BBQ8N257 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC16.74■□□□□ 0.27
HIST3H2BBQ8N257 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.74■□□□□ 0.27
HIST3H2BBQ8N257 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST3H2BBQ8N257 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST3H2BBQ8N257 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIST3H2BBQ8N257 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms