Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
SIX5Q8N196 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SIX5Q8N196 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.93■■□□□ 1.26
SIX5Q8N196 AL355802.2-201ENST00000402069 882 ntBASIC22.93■■□□□ 1.26
SIX5Q8N196 AP005435.1-201ENST00000529293 1178 ntBASIC22.93■■□□□ 1.26
SIX5Q8N196 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.93■■□□□ 1.26
SIX5Q8N196 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SIX5Q8N196 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.93■■□□□ 1.26
SIX5Q8N196 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SIX5Q8N196 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SIX5Q8N196 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.93■■□□□ 1.26
SIX5Q8N196 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
SIX5Q8N196 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SIX5Q8N196 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.93■■□□□ 1.26
SIX5Q8N196 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SIX5Q8N196 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SIX5Q8N196 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SIX5Q8N196 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SIX5Q8N196 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
SIX5Q8N196 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SIX5Q8N196 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.92■■□□□ 1.26
SIX5Q8N196 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.92■■□□□ 1.26
SIX5Q8N196 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC22.92■■□□□ 1.26
SIX5Q8N196 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.92■■□□□ 1.26
SIX5Q8N196 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.92■■□□□ 1.26
SIX5Q8N196 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.92■■□□□ 1.26
SIX5Q8N196 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SIX5Q8N196 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SIX5Q8N196 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.92■■□□□ 1.26
SIX5Q8N196 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.92■■□□□ 1.26
SIX5Q8N196 AL161729.1-201ENST00000604104 1402 ntBASIC22.91■■□□□ 1.26
SIX5Q8N196 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SIX5Q8N196 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SIX5Q8N196 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.91■■□□□ 1.26
SIX5Q8N196 OR2I1P-207ENST00000453522 948 ntBASIC22.91■■□□□ 1.26
SIX5Q8N196 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SIX5Q8N196 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
SIX5Q8N196 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.91■■□□□ 1.26
SIX5Q8N196 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SIX5Q8N196 ALDH1A3-203ENST00000557963 1670 ntBASIC22.9■■□□□ 1.26
SIX5Q8N196 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SIX5Q8N196 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SIX5Q8N196 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
SIX5Q8N196 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.9■■□□□ 1.26
SIX5Q8N196 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
SIX5Q8N196 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.9■■□□□ 1.26
SIX5Q8N196 AC006970.2-201ENST00000450065 779 ntBASIC22.9■■□□□ 1.26
SIX5Q8N196 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.9■■□□□ 1.26
SIX5Q8N196 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.9■■□□□ 1.26
SIX5Q8N196 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.9■■□□□ 1.26
SIX5Q8N196 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
SIX5Q8N196 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SIX5Q8N196 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
SIX5Q8N196 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
SIX5Q8N196 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
SIX5Q8N196 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
SIX5Q8N196 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.89■■□□□ 1.25
SIX5Q8N196 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.89■■□□□ 1.25
SIX5Q8N196 AL499627.2-201ENST00000606283 725 ntBASIC22.89■■□□□ 1.25
SIX5Q8N196 AL109923.1-201ENST00000618799 583 ntBASIC22.89■■□□□ 1.25
SIX5Q8N196 TMEM191A-211ENST00000637163 1067 ntBASIC22.89■■□□□ 1.25
SIX5Q8N196 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
SIX5Q8N196 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SIX5Q8N196 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SIX5Q8N196 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SIX5Q8N196 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.88■■□□□ 1.25
SIX5Q8N196 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.88■■□□□ 1.25
SIX5Q8N196 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.88■■□□□ 1.25
SIX5Q8N196 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.88■■□□□ 1.25
SIX5Q8N196 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.88■■□□□ 1.25
SIX5Q8N196 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SIX5Q8N196 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SIX5Q8N196 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.87■■□□□ 1.25
SIX5Q8N196 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.87■■□□□ 1.25
SIX5Q8N196 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SIX5Q8N196 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SIX5Q8N196 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SIX5Q8N196 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.87■■□□□ 1.25
SIX5Q8N196 BID-214ENST00000617586 542 ntTSL 5 BASIC22.87■■□□□ 1.25
SIX5Q8N196 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.87■■□□□ 1.25
SIX5Q8N196 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.87■■□□□ 1.25
SIX5Q8N196 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
SIX5Q8N196 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.86■■□□□ 1.25
SIX5Q8N196 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.86■■□□□ 1.25
SIX5Q8N196 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SIX5Q8N196 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.86■■□□□ 1.25
SIX5Q8N196 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SIX5Q8N196 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
SIX5Q8N196 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.86■■□□□ 1.25
SIX5Q8N196 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SIX5Q8N196 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.86■■□□□ 1.25
SIX5Q8N196 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
SIX5Q8N196 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SIX5Q8N196 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SIX5Q8N196 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
SIX5Q8N196 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SIX5Q8N196 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
SIX5Q8N196 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
SIX5Q8N196 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
SIX5Q8N196 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms