Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 GANAB-202ENST00000356638 3608 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.873e-13■■■■□ 23.9
LARP4Q71RC2 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.552e-11■■■■□ 23.8
LARP4Q71RC2 AL117329.1-201ENST00000423737 1815 ntTSL 2 BASIC9.47□□□□□ -0.891e-6■■■■□ 23.8
LARP4Q71RC2 SNRPA-202ENST00000596860 336 ntTSL 28.39□□□□□ -1.076e-17■■■■□ 23.8
LARP4Q71RC2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.242e-7■■■■□ 23.8
LARP4Q71RC2 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.37□□□□□ -0.272e-7■■■■□ 23.8
LARP4Q71RC2 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC12.35□□□□□ -0.432e-7■■■■□ 23.8
LARP4Q71RC2 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC12.35□□□□□ -0.432e-7■■■■□ 23.8
LARP4Q71RC2 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.81□□□□□ -1.642e-7■■■■□ 23.8
LARP4Q71RC2 C20orf27-204ENST00000399683 933 ntTSL 215.49■□□□□ 0.073e-8■■■■□ 23.8
LARP4Q71RC2 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.032e-6■■■■□ 23.7
LARP4Q71RC2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.81■■□□□ 1.882e-6■■■■□ 23.7
LARP4Q71RC2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.74■■□□□ 1.712e-6■■■■□ 23.7
LARP4Q71RC2 JUND-202ENST00000600972 500 ntTSL 224.38■■□□□ 1.492e-6■■■■□ 23.7
LARP4Q71RC2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.492e-6■■■■□ 23.7
LARP4Q71RC2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.432e-6■■■■□ 23.7
LARP4Q71RC2 PRKAR1B-202ENST00000400758 888 ntTSL 323.19■■□□□ 1.32e-6■■■■□ 23.7
LARP4Q71RC2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.262e-6■■■■□ 23.7
LARP4Q71RC2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.265e-12■■■■□ 23.7
LARP4Q71RC2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.182e-6■■■■□ 23.7
LARP4Q71RC2 SAC3D1-204ENST00000530213 1563 ntTSL 1 (best)22.13■■□□□ 1.135e-12■■■■□ 23.7
LARP4Q71RC2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.072e-6■■■■□ 23.7
LARP4Q71RC2 LINC01089-206ENST00000537157 479 ntTSL 221.2■□□□□ 0.982e-6■■■■□ 23.7
LARP4Q71RC2 SAC3D1-202ENST00000528109 1518 ntTSL 1 (best)21.19■□□□□ 0.985e-12■■■■□ 23.7
LARP4Q71RC2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.5■□□□□ 0.872e-6■■■■□ 23.7
LARP4Q71RC2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.42■□□□□ 0.72e-6■■■■□ 23.7
LARP4Q71RC2 SAC3D1-203ENST00000529996 1366 ntTSL 219.19■□□□□ 0.665e-12■■■■□ 23.7
LARP4Q71RC2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.665e-12■■■■□ 23.7
LARP4Q71RC2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.62e-6■■■■□ 23.7
LARP4Q71RC2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.582e-6■■■■□ 23.7
LARP4Q71RC2 ABCB8-205ENST00000466514 2199 ntTSL 218.09■□□□□ 0.492e-6■■■■□ 23.7
LARP4Q71RC2 ABCB8-213ENST00000482309 1994 ntTSL 218.07■□□□□ 0.482e-6■■■■□ 23.7
LARP4Q71RC2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.442e-6■■■■□ 23.7
LARP4Q71RC2 LINC01089-201ENST00000428029 1024 ntTSL 217.51■□□□□ 0.392e-6■■■■□ 23.7
LARP4Q71RC2 TAF10-202ENST00000527248 425 ntTSL 317.4■□□□□ 0.382e-6■■■■□ 23.7
LARP4Q71RC2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.352e-6■■■■□ 23.7
LARP4Q71RC2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.18■□□□□ 0.342e-6■■■■□ 23.7
LARP4Q71RC2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.145e-12■■■■□ 23.7
LARP4Q71RC2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.122e-6■■■■□ 23.7
LARP4Q71RC2 PPP6R1-204ENST00000587457 2389 ntTSL 215.79■□□□□ 0.125e-12■■■■□ 23.7
LARP4Q71RC2 LINC01089-210ENST00000543167 1059 ntTSL 215.78■□□□□ 0.122e-6■■■■□ 23.7
LARP4Q71RC2 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.73■□□□□ 0.112e-6■■■■□ 23.7
LARP4Q71RC2 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.12e-6■■■■□ 23.7
LARP4Q71RC2 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.43■□□□□ 0.062e-6■■■■□ 23.7
LARP4Q71RC2 NFIC-211ENST00000641145 8399 ntBASIC15.32■□□□□ 0.042e-6■■■■□ 23.7
LARP4Q71RC2 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.28■□□□□ 0.042e-6■■■■□ 23.7
LARP4Q71RC2 RHOF-206ENST00000545544 826 ntTSL 515.24■□□□□ 0.032e-6■■■■□ 23.7
LARP4Q71RC2 RHOF-205ENST00000541657 1626 ntTSL 515.19■□□□□ 0.022e-6■■■■□ 23.7
LARP4Q71RC2 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.06■□□□□ 02e-6■■■■□ 23.7
LARP4Q71RC2 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.91□□□□□ -0.022e-6■■■■□ 23.7
LARP4Q71RC2 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.022e-6■■■■□ 23.7
LARP4Q71RC2 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.8□□□□□ -0.042e-6■■■■□ 23.7
LARP4Q71RC2 ACP2-210ENST00000531004 1457 ntTSL 214.66□□□□□ -0.062e-6■■■■□ 23.7
LARP4Q71RC2 AC010327.5-201ENST00000586923 3061 ntBASIC14.64□□□□□ -0.075e-12■■■■□ 23.7
LARP4Q71RC2 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.072e-6■■■■□ 23.7
LARP4Q71RC2 SAC3D1-206ENST00000533017 755 ntTSL 314.56□□□□□ -0.085e-12■■■■□ 23.7
LARP4Q71RC2 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.44□□□□□ -0.12e-6■■■■□ 23.7
LARP4Q71RC2 LINC01089-203ENST00000535614 480 ntTSL 414.43□□□□□ -0.12e-6■■■■□ 23.7
LARP4Q71RC2 IMPDH1-207ENST00000469328 2295 ntTSL 514.41□□□□□ -0.12e-6■■■■□ 23.7
LARP4Q71RC2 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.12e-6■■■■□ 23.7
LARP4Q71RC2 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.112e-6■■■■□ 23.7
LARP4Q71RC2 ACP2-213ENST00000534448 2170 ntTSL 514.28□□□□□ -0.122e-6■■■■□ 23.7
LARP4Q71RC2 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.28□□□□□ -0.122e-6■■■■□ 23.7
LARP4Q71RC2 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.26□□□□□ -0.132e-6■■■■□ 23.7
LARP4Q71RC2 LINC01089-208ENST00000541694 875 ntTSL 214.22□□□□□ -0.132e-6■■■■□ 23.7
LARP4Q71RC2 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.162e-6■■■■□ 23.7
LARP4Q71RC2 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.05□□□□□ -0.162e-6■■■■□ 23.7
LARP4Q71RC2 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.65□□□□□ -0.222e-6■■■■□ 23.7
LARP4Q71RC2 IMPDH1-211ENST00000484496 2422 ntTSL 513.51□□□□□ -0.252e-6■■■■□ 23.7
LARP4Q71RC2 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.21□□□□□ -0.292e-6■■■■□ 23.7
LARP4Q71RC2 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.332e-6■■■■□ 23.7
LARP4Q71RC2 OLFML3-204ENST00000491700 2063 ntTSL 212.98□□□□□ -0.332e-6■■■■□ 23.7
LARP4Q71RC2 LINC01089-205ENST00000536662 560 ntTSL 4 BASIC12.55□□□□□ -0.42e-6■■■■□ 23.7
LARP4Q71RC2 OLFML3-201ENST00000320334 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.432e-6■■■■□ 23.7
LARP4Q71RC2 TAF10-205ENST00000616342 5392 ntTSL 1 (best)12.36□□□□□ -0.432e-6■■■■□ 23.7
LARP4Q71RC2 OLFML3-202ENST00000369551 1934 ntTSL 2 BASIC12.35□□□□□ -0.432e-6■■■■□ 23.7
LARP4Q71RC2 ABCB8-222ENST00000542328 4371 ntTSL 2 BASIC11.73□□□□□ -0.532e-6■■■■□ 23.7
LARP4Q71RC2 CPSF3-202ENST00000460593 3157 ntTSL 1 (best) BASIC11.71□□□□□ -0.532e-6■■■■□ 23.7
LARP4Q71RC2 LINC01089-204ENST00000535643 1014 ntTSL 1 (best)11.62□□□□□ -0.552e-6■■■■□ 23.7
LARP4Q71RC2 CPSF3-204ENST00000489403 688 ntTSL 511.22□□□□□ -0.612e-6■■■■□ 23.7
LARP4Q71RC2 CSRP1-215ENST00000532313 5239 ntTSL 1 (best)11.12□□□□□ -0.632e-6■■■■□ 23.7
LARP4Q71RC2 ABCB8-214ENST00000482899 3743 ntTSL 210.95□□□□□ -0.662e-6■■■■□ 23.7
LARP4Q71RC2 KIF18B-202ENST00000587309 4217 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.842e-6■■■■□ 23.7
LARP4Q71RC2 ACP2-214ENST00000534752 274 ntTSL 59.46□□□□□ -0.92e-6■■■■□ 23.7
LARP4Q71RC2 DGUOK-206ENST00000489796 692 ntTSL 39.22□□□□□ -0.932e-6■■■■□ 23.7
LARP4Q71RC2 DGUOK-204ENST00000462551 573 ntTSL 29.17□□□□□ -0.942e-6■■■■□ 23.7
LARP4Q71RC2 AURKA-204ENST00000395907 1902 ntTSL 3 BASIC8.93□□□□□ -0.982e-6■■■■□ 23.7
LARP4Q71RC2 DECR1-201ENST00000220764 1207 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.031e-6■■■■□ 23.7
LARP4Q71RC2 DECR1-210ENST00000520148 441 ntTSL 38.15□□□□□ -1.11e-6■■■■□ 23.7
LARP4Q71RC2 LINC01089-212ENST00000545885 559 ntTSL 28.11□□□□□ -1.112e-6■■■■□ 23.7
LARP4Q71RC2 OLFML3-205ENST00000633022 495 ntTSL 48.11□□□□□ -1.112e-6■■■■□ 23.7
LARP4Q71RC2 CSRP1-211ENST00000527662 4208 ntTSL 27.73□□□□□ -1.172e-6■■■■□ 23.7
LARP4Q71RC2 CSRP1-218ENST00000533402 8475 ntTSL 1 (best)7.3□□□□□ -1.242e-6■■■■□ 23.7
LARP4Q71RC2 DECR1-202ENST00000517301 464 ntTSL 36.1□□□□□ -1.431e-6■■■■□ 23.7
LARP4Q71RC2 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.491e-6■■■■□ 23.7
LARP4Q71RC2 DECR1-208ENST00000519328 816 ntTSL 1 (best)5.26□□□□□ -1.571e-6■■■■□ 23.7
LARP4Q71RC2 DGUOK-207ENST00000493055 593 ntTSL 24.97□□□□□ -1.612e-6■■■■□ 23.7
LARP4Q71RC2 DECR1-204ENST00000517597 897 ntTSL 54.78□□□□□ -1.641e-6■■■■□ 23.7
LARP4Q71RC2 DECR1-219ENST00000524332 645 ntTSL 23.76□□□□□ -1.811e-6■■■■□ 23.7
LARP4Q71RC2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.976e-7■■■■□ 23.7
Retrieved 100 of 15,922 protein–RNA pairs in 159.6 ms