RNA–Protein interactions for RNA: ENST00000527662.5

CSRP1-211, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 2

Gene CSRP1, Length 4,208 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-211ENST00000527662 NISCHQ9Y2I1 1504 aa15.72■□□□□ 0.11
CSRP1-211ENST00000527662 DCAF8L2P0C7V8 631 aa15.19■□□□□ 0.02
CSRP1-211ENST00000527662 SHROOM4Q9ULL8 1493 aa14.19□□□□□ -0.14
CSRP1-211ENST00000527662 ABCC9O60706 1549 aa13.95□□□□□ -0.18
CSRP1-211ENST00000527662 SUPT5HO00267 1087 aaKnown RBP13.87□□□□□ -0.19
CSRP1-211ENST00000527662 PABPN1Q86U42 306 aaKnown RBP eCLIP13.6□□□□□ -0.23
CSRP1-211ENST00000527662 EHMT2Q96KQ7 1210 aa13.31□□□□□ -0.28
CSRP1-211ENST00000527662 CCDC180Q9P1Z9 1646 aa13.14□□□□□ -0.31
CSRP1-211ENST00000527662 FAM9AQ8IZU1 332 aaPredicted RBP13.04□□□□□ -0.32
CSRP1-211ENST00000527662 SCRIBQ14160 1630 aa12.99□□□□□ -0.33
CSRP1-211ENST00000527662 ZCCHC6Q5VYS8 1495 aaKnown RBP12.98□□□□□ -0.33
CSRP1-211ENST00000527662 RANGAP1P46060 587 aaPredicted RBP12.89□□□□□ -0.35
CSRP1-211ENST00000527662 RB1CC1Q8TDY2 1594 aa12.84□□□□□ -0.35
CSRP1-211ENST00000527662 TRIM41Q8WV44 630 aa12.79□□□□□ -0.36
CSRP1-211ENST00000527662 NACADO15069 1562 aa12.72□□□□□ -0.37
CSRP1-211ENST00000527662 TTBK1Q5TCY1 1321 aaPredicted RBP12.65□□□□□ -0.38
CSRP1-211ENST00000527662 ATP1B4Q9UN42 357 aaPredicted RBP12.57□□□□□ -0.4
CSRP1-211ENST00000527662 UBTFP17480 764 aaKnown RBP12.55□□□□□ -0.4
CSRP1-211ENST00000527662 CECR2Q9BXF3 1484 aa12.53□□□□□ -0.4
CSRP1-211ENST00000527662 CHIC1Q5VXU3 224 aa12.52□□□□□ -0.41
CSRP1-211ENST00000527662 FBLN2P98095 1184 aa12.51□□□□□ -0.41
CSRP1-211ENST00000527662 DCAF1Q9Y4B6 1507 aa12.44□□□□□ -0.42
CSRP1-211ENST00000527662 PCGF6Q9BYE7 350 aa12.43□□□□□ -0.42
CSRP1-211ENST00000527662 LOC105371045A0A1W2PR82 267 aa12.41□□□□□ -0.42
CSRP1-211ENST00000527662 DNAJC5BQ9UF47 199 aa12.39□□□□□ -0.43
CSRP1-211ENST00000527662 RSF1Q96T23 1441 aaPredicted RBP12.39□□□□□ -0.43
CSRP1-211ENST00000527662 PPARGC1BQ86YN6 1023 aaKnown RBP12.38□□□□□ -0.43
CSRP1-211ENST00000527662 APLP2Q06481 763 aa12.36□□□□□ -0.43
CSRP1-211ENST00000527662 ZEB1P37275 1124 aaPredicted RBP12.33□□□□□ -0.44
CSRP1-211ENST00000527662 BAZ1BQ9UIG0 1483 aaKnown RBP12.31□□□□□ -0.44
CSRP1-211ENST00000527662 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.3□□□□□ -0.44
CSRP1-211ENST00000527662 HNRNPUL2Q1KMD3 747 aaKnown RBP12.3□□□□□ -0.44
CSRP1-211ENST00000527662 HRCP23327 699 aa12.29□□□□□ -0.44
CSRP1-211ENST00000527662 MROH2BQ7Z745 1585 aa12.28□□□□□ -0.44
CSRP1-211ENST00000527662 MYO15BQ96JP2 1530 aa12.25□□□□□ -0.45
CSRP1-211ENST00000527662 TRIM26Q12899 539 aaPredicted RBP12.24□□□□□ -0.45
CSRP1-211ENST00000527662 ARID3CA6NKF2 412 aa12.22□□□□□ -0.45
CSRP1-211ENST00000527662 BAZ1AQ9NRL2 1556 aaPredicted RBP12.21□□□□□ -0.46
CSRP1-211ENST00000527662 P3H3Q8IVL6 736 aa12.2□□□□□ -0.46
CSRP1-211ENST00000527662 ERCC6Q03468 1493 aa12.19□□□□□ -0.46
CSRP1-211ENST00000527662 ATAD2BQ9ULI0 1458 aa12.1□□□□□ -0.47
CSRP1-211ENST00000527662 WIZO95785 1651 aa12.08□□□□□ -0.48
CSRP1-211ENST00000527662 MYT1LQ9UL68 1186 aa12.07□□□□□ -0.48
CSRP1-211ENST00000527662 ITGAEP38570 1179 aa12.06□□□□□ -0.48
CSRP1-211ENST00000527662 CHMP7Q8WUX9 453 aaPredicted RBP12.06□□□□□ -0.48
CSRP1-211ENST00000527662 CSRNP3Q8WYN3 585 aa12.06□□□□□ -0.48
CSRP1-211ENST00000527662 EIF4G1Q04637 1599 aaKnown RBP12.05□□□□□ -0.48
CSRP1-211ENST00000527662 CCDC88BA6NC98 1476 aa12.03□□□□□ -0.48
CSRP1-211ENST00000527662 BICRAQ9NZM4 1560 aa12.02□□□□□ -0.48
CSRP1-211ENST00000527662 SMARCA2P51531 1590 aa12.01□□□□□ -0.49
CSRP1-211ENST00000527662 SMARCA4P51532 1647 aa11.99□□□□□ -0.49
CSRP1-211ENST00000527662 CCER1Q8TC90 406 aaPredicted RBP11.97□□□□□ -0.49
CSRP1-211ENST00000527662 CADPSQ9ULU8 1353 aa11.97□□□□□ -0.49
CSRP1-211ENST00000527662 CC2D2AQ9P2K1 1620 aa11.96□□□□□ -0.49
CSRP1-211ENST00000527662 WRNQ14191 1432 aaPredicted RBP eCLIP11.94□□□□□ -0.5
CSRP1-211ENST00000527662 TDRD9Q8NDG6 1382 aaKnown RBP11.94□□□□□ -0.5
CSRP1-211ENST00000527662 PDS5BQ9NTI5 1447 aa11.93□□□□□ -0.5
CSRP1-211ENST00000527662 NESP48681 1621 aa11.92□□□□□ -0.5
CSRP1-211ENST00000527662 NCAPD3P42695 1498 aa11.87□□□□□ -0.51
CSRP1-211ENST00000527662 ABCC8Q09428 1581 aa11.87□□□□□ -0.51
CSRP1-211ENST00000527662 CENPBP07199 599 aaPredicted RBP11.85□□□□□ -0.51
CSRP1-211ENST00000527662 TOP2AP11388 1531 aaKnown RBP11.84□□□□□ -0.51
CSRP1-211ENST00000527662 UNC13AQ9UPW8 1703 aa11.83□□□□□ -0.52
CSRP1-211ENST00000527662 FANCD2Q9BXW9 1451 aa11.81□□□□□ -0.52
CSRP1-211ENST00000527662 NPM1P06748 294 aaKnown RBP eCLIP11.8□□□□□ -0.52
CSRP1-211ENST00000527662 FAM50AQ14320 339 aaKnown RBP11.8□□□□□ -0.52
CSRP1-211ENST00000527662 SOGA1O94964 1423 aa11.8□□□□□ -0.52
CSRP1-211ENST00000527662 ZNF777Q9ULD5 760 aaPredicted RBP11.8□□□□□ -0.52
CSRP1-211ENST00000527662 CUX2O14529 1486 aa11.8□□□□□ -0.52
CSRP1-211ENST00000527662 KCNH8Q96L42 1107 aa11.78□□□□□ -0.52
CSRP1-211ENST00000527662 PELP1Q8IZL8 1130 aaKnown RBP11.78□□□□□ -0.52
CSRP1-211ENST00000527662 CEP164Q9UPV0 1460 aa11.77□□□□□ -0.52
CSRP1-211ENST00000527662 PLPPR3Q6T4P5 718 aa11.76□□□□□ -0.53
CSRP1-211ENST00000527662 KIF27Q86VH2 1401 aa11.74□□□□□ -0.53
CSRP1-211ENST00000527662 TRHP20396 242 aaPredicted RBP11.72□□□□□ -0.53
CSRP1-211ENST00000527662 RAD54L2Q9Y4B4 1467 aa11.7□□□□□ -0.54
CSRP1-211ENST00000527662 EEA1Q15075 1411 aa11.69□□□□□ -0.54
CSRP1-211ENST00000527662 CYB5RLQ6IPT4 315 aa11.68□□□□□ -0.54
CSRP1-211ENST00000527662 CARMIL1Q5VZK9 1371 aa11.68□□□□□ -0.54
CSRP1-211ENST00000527662 AQRO60306 1485 aaKnown RBP eCLIP11.66□□□□□ -0.54
CSRP1-211ENST00000527662 RUSC2Q8N2Y8 1516 aa11.63□□□□□ -0.55
CSRP1-211ENST00000527662 OSCARQ8IYS5 282 aa11.62□□□□□ -0.55
CSRP1-211ENST00000527662 CDK11AQ9UQ88 783 aaPredicted RBP11.62□□□□□ -0.55
CSRP1-211ENST00000527662 CFTRP13569 1480 aa11.61□□□□□ -0.55
CSRP1-211ENST00000527662 TRIM52Q96A61 297 aa11.59□□□□□ -0.55
CSRP1-211ENST00000527662 FGD5Q6ZNL6 1462 aa11.59□□□□□ -0.55
CSRP1-211ENST00000527662 CHIC2Q9UKJ5 165 aa11.58□□□□□ -0.56
CSRP1-211ENST00000527662 HMGXB3Q12766 1538 aa11.58□□□□□ -0.56
CSRP1-211ENST00000527662 JPH4Q96JJ6 628 aa11.58□□□□□ -0.56
CSRP1-211ENST00000527662 CLIP1P30622 1438 aa11.57□□□□□ -0.56
CSRP1-211ENST00000527662 DIEXFQ68CQ4 756 aaKnown RBP11.56□□□□□ -0.56
CSRP1-211ENST00000527662 PLEKHD1A6NEE1 506 aa11.55□□□□□ -0.56
CSRP1-211ENST00000527662 TNIKQ9UKE5 1360 aa11.53□□□□□ -0.56
CSRP1-211ENST00000527662 GOLGA3Q08378 1498 aa11.52□□□□□ -0.56
CSRP1-211ENST00000527662 SENP3Q9H4L4 574 aaPredicted RBP11.52□□□□□ -0.57
CSRP1-211ENST00000527662 MTUS2Q5JR59 1369 aa11.5□□□□□ -0.57
CSRP1-211ENST00000527662 CEP162Q5TB80 1403 aa11.5□□□□□ -0.57
CSRP1-211ENST00000527662 MRC2Q9UBG0 1479 aa11.5□□□□□ -0.57
CSRP1-211ENST00000527662 GAPVD1Q14C86 1478 aa11.49□□□□□ -0.57
CSRP1-211ENST00000527662 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms