RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 NISCHQ9Y2I1 1504 aa13.62□□□□□ -0.23
CSRP1-218ENST00000533402 MYT1Q01538 1121 aa13.07□□□□□ -0.32
CSRP1-218ENST00000533402 PELP1Q8IZL8 1130 aaKnown RBP13.04□□□□□ -0.32
CSRP1-218ENST00000533402 DCAF8L2P0C7V8 631 aa12.73□□□□□ -0.37
CSRP1-218ENST00000533402 ERICH6Q7L0X2 663 aa12.44□□□□□ -0.42
CSRP1-218ENST00000533402 FAM9AQ8IZU1 332 aaPredicted RBP12.42□□□□□ -0.42
CSRP1-218ENST00000533402 CENPBP07199 599 aaPredicted RBP12.35□□□□□ -0.43
CSRP1-218ENST00000533402 CCER1Q8TC90 406 aaPredicted RBP12.28□□□□□ -0.44
CSRP1-218ENST00000533402 TTBK1Q5TCY1 1321 aaPredicted RBP12.21□□□□□ -0.46
CSRP1-218ENST00000533402 PCGF6Q9BYE7 350 aa12.09□□□□□ -0.47
CSRP1-218ENST00000533402 CCDC180Q9P1Z9 1646 aa12.02□□□□□ -0.49
CSRP1-218ENST00000533402 SUPT5HO00267 1087 aaKnown RBP12.02□□□□□ -0.49
CSRP1-218ENST00000533402 ZEB1P37275 1124 aaPredicted RBP12.01□□□□□ -0.49
CSRP1-218ENST00000533402 NEFLP07196 543 aa11.88□□□□□ -0.51
CSRP1-218ENST00000533402 YTHDC1Q96MU7 727 aaKnown RBP11.86□□□□□ -0.51
CSRP1-218ENST00000533402 APLP2Q06481 763 aa11.81□□□□□ -0.52
CSRP1-218ENST00000533402 EHMT2Q96KQ7 1210 aa11.76□□□□□ -0.53
CSRP1-218ENST00000533402 HRCP23327 699 aa11.73□□□□□ -0.53
CSRP1-218ENST00000533402 RTL5Q5HYW3 569 aaPredicted RBP11.63□□□□□ -0.55
CSRP1-218ENST00000533402 DAXXQ9UER7 740 aaPredicted RBP11.61□□□□□ -0.55
CSRP1-218ENST00000533402 SHROOM4Q9ULL8 1493 aa11.57□□□□□ -0.56
CSRP1-218ENST00000533402 GTF3C3Q9Y5Q9 886 aa11.45□□□□□ -0.58
CSRP1-218ENST00000533402 PPARGC1BQ86YN6 1023 aaKnown RBP11.44□□□□□ -0.58
CSRP1-218ENST00000533402 EIF5BO60841 1220 aaKnown RBP11.43□□□□□ -0.58
CSRP1-218ENST00000533402 GLIPR1L2Q4G1C9 344 aa11.42□□□□□ -0.58
CSRP1-218ENST00000533402 TRIM26Q12899 539 aaPredicted RBP11.38□□□□□ -0.59
CSRP1-218ENST00000533402 ZCCHC6Q5VYS8 1495 aaKnown RBP11.36□□□□□ -0.59
CSRP1-218ENST00000533402 ZNF316A6NFI3 1004 aaPredicted RBP11.34□□□□□ -0.59
CSRP1-218ENST00000533402 NACADO15069 1562 aa11.34□□□□□ -0.59
CSRP1-218ENST00000533402 RB1CC1Q8TDY2 1594 aa11.33□□□□□ -0.6
CSRP1-218ENST00000533402 DCAF1Q9Y4B6 1507 aa11.31□□□□□ -0.6
CSRP1-218ENST00000533402 DIEXFQ68CQ4 756 aaKnown RBP11.3□□□□□ -0.6
CSRP1-218ENST00000533402 ABCC9O60706 1549 aa11.29□□□□□ -0.6
CSRP1-218ENST00000533402 MYT1LQ9UL68 1186 aa11.24□□□□□ -0.61
CSRP1-218ENST00000533402 ACIN1Q9UKV3 1341 aaKnown RBP11.23□□□□□ -0.61
CSRP1-218ENST00000533402 BCANQ96GW7 911 aa11.19□□□□□ -0.62
CSRP1-218ENST00000533402 MYO15BQ96JP2 1530 aa11.19□□□□□ -0.62
CSRP1-218ENST00000533402 CDK11AQ9UQ88 783 aaPredicted RBP11.19□□□□□ -0.62
CSRP1-218ENST00000533402 ATP1B4Q9UN42 357 aaPredicted RBP11.18□□□□□ -0.62
CSRP1-218ENST00000533402 TRIM41Q8WV44 630 aa11.13□□□□□ -0.63
CSRP1-218ENST00000533402 BCL11AQ9H165 835 aa11.08□□□□□ -0.64
CSRP1-218ENST00000533402 CLSPNQ9HAW4 1339 aa11.08□□□□□ -0.64
CSRP1-218ENST00000533402 ANP32AP39687 249 aaKnown RBP11.04□□□□□ -0.64
CSRP1-218ENST00000533402 SCAF1Q9H7N4 1312 aaKnown RBP11.03□□□□□ -0.64
CSRP1-218ENST00000533402 SCRIBQ14160 1630 aa11.03□□□□□ -0.64
CSRP1-218ENST00000533402 RANGAP1P46060 587 aaPredicted RBP11□□□□□ -0.65
CSRP1-218ENST00000533402 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.99□□□□□ -0.65
CSRP1-218ENST00000533402 HNRNPUL2Q1KMD3 747 aaKnown RBP10.99□□□□□ -0.65
CSRP1-218ENST00000533402 ANP32EQ9BTT0 268 aa10.98□□□□□ -0.65
CSRP1-218ENST00000533402 NBR1Q14596 966 aa10.95□□□□□ -0.66
CSRP1-218ENST00000533402 UBTFP17480 764 aaKnown RBP10.93□□□□□ -0.66
CSRP1-218ENST00000533402 ANP32BQ92688 251 aaKnown RBP10.9□□□□□ -0.67
CSRP1-218ENST00000533402 POLR3GLQ9BT43 218 aa10.89□□□□□ -0.67
CSRP1-218ENST00000533402 NEUROD1Q13562 356 aa10.89□□□□□ -0.67
CSRP1-218ENST00000533402 NPM2Q86SE8 214 aaKnown RBP10.86□□□□□ -0.67
CSRP1-218ENST00000533402 CNGB1Q14028 1251 aaPredicted RBP10.86□□□□□ -0.67
CSRP1-218ENST00000533402 BAZ1AQ9NRL2 1556 aaPredicted RBP10.86□□□□□ -0.67
CSRP1-218ENST00000533402 TNNT2P45379 298 aaPredicted RBP10.84□□□□□ -0.67
CSRP1-218ENST00000533402 LOC105371045A0A1W2PR82 267 aa10.83□□□□□ -0.68
CSRP1-218ENST00000533402 FKBP8Q14318 412 aa10.82□□□□□ -0.68
CSRP1-218ENST00000533402 ZBTB47Q9UFB7 747 aaPredicted RBP10.8□□□□□ -0.68
CSRP1-218ENST00000533402 ANP32CO43423 234 aa10.78□□□□□ -0.68
CSRP1-218ENST00000533402 RTN4Q9NQC3 1192 aaKnown RBP10.77□□□□□ -0.69
CSRP1-218ENST00000533402 ESF1Q9H501 851 aaKnown RBP10.77□□□□□ -0.69
CSRP1-218ENST00000533402 ITGAEP38570 1179 aa10.75□□□□□ -0.69
CSRP1-218ENST00000533402 SMARCA2P51531 1590 aa10.74□□□□□ -0.69
CSRP1-218ENST00000533402 SLC4A1APQ9BWU0 796 aaKnown RBP10.74□□□□□ -0.69
CSRP1-218ENST00000533402 CDK11BP21127 795 aaKnown RBP10.73□□□□□ -0.69
CSRP1-218ENST00000533402 PABPN1Q86U42 306 aaKnown RBP eCLIP10.73□□□□□ -0.69
CSRP1-218ENST00000533402 CHIC1Q5VXU3 224 aa10.73□□□□□ -0.69
CSRP1-218ENST00000533402 ARXQ96QS3 562 aa10.71□□□□□ -0.69
CSRP1-218ENST00000533402 ERICH6BQ5W0A0 696 aa10.71□□□□□ -0.7
CSRP1-218ENST00000533402 EEA1Q15075 1411 aa10.7□□□□□ -0.7
CSRP1-218ENST00000533402 NEFMP07197 916 aa10.69□□□□□ -0.7
CSRP1-218ENST00000533402 BAZ1BQ9UIG0 1483 aaKnown RBP10.68□□□□□ -0.7
CSRP1-218ENST00000533402 NAP1L5Q96NT1 182 aaPredicted RBP10.67□□□□□ -0.7
CSRP1-218ENST00000533402 TRIM44Q96DX7 344 aaPredicted RBP10.63□□□□□ -0.71
CSRP1-218ENST00000533402 NCLP19338 710 aaKnown RBP10.63□□□□□ -0.71
CSRP1-218ENST00000533402 HSP90AA1P07900 732 aaKnown RBP10.62□□□□□ -0.71
CSRP1-218ENST00000533402 NPM1P06748 294 aaKnown RBP eCLIP10.61□□□□□ -0.71
CSRP1-218ENST00000533402 DEKP35659 375 aaKnown RBP10.61□□□□□ -0.71
CSRP1-218ENST00000533402 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.61□□□□□ -0.71
CSRP1-218ENST00000533402 UPF2Q9HAU5 1272 aaKnown RBP10.59□□□□□ -0.71
CSRP1-218ENST00000533402 AMER1Q5JTC6 1135 aaPredicted RBP10.58□□□□□ -0.72
CSRP1-218ENST00000533402 CANXP27824 592 aaKnown RBP10.56□□□□□ -0.72
CSRP1-218ENST00000533402 CSRNP3Q8WYN3 585 aa10.55□□□□□ -0.72
CSRP1-218ENST00000533402 CCDC136Q96JN2 1154 aa10.55□□□□□ -0.72
CSRP1-218ENST00000533402 RSF1Q96T23 1441 aaPredicted RBP10.54□□□□□ -0.72
CSRP1-218ENST00000533402 FBLN2P98095 1184 aa10.52□□□□□ -0.73
CSRP1-218ENST00000533402 PRKCSHP14314 528 aaPredicted RBP10.51□□□□□ -0.73
CSRP1-218ENST00000533402 DDRGK1Q96HY6 314 aa10.51□□□□□ -0.73
CSRP1-218ENST00000533402 HNRNPUQ00839 825 aaKnown RBP eCLIP10.5□□□□□ -0.73
CSRP1-218ENST00000533402 PPM1GO15355 546 aaPredicted RBP10.5□□□□□ -0.73
CSRP1-218ENST00000533402 NOP58Q9Y2X3 529 aaKnown RBP10.49□□□□□ -0.73
CSRP1-218ENST00000533402 TOP2AP11388 1531 aaKnown RBP10.49□□□□□ -0.73
CSRP1-218ENST00000533402 SMARCA4P51532 1647 aa10.48□□□□□ -0.73
CSRP1-218ENST00000533402 SLC24A1O60721 1099 aa10.46□□□□□ -0.73
CSRP1-218ENST00000533402 DNTTIP2Q5QJE6 756 aaKnown RBP10.46□□□□□ -0.74
CSRP1-218ENST00000533402 MIER1Q8N108 512 aa10.45□□□□□ -0.74
CSRP1-218ENST00000533402 TRIM52Q96A61 297 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms