Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN20P56880 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN20P56880 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
CLDN20P56880 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.4■□□□□ 0.86
CLDN20P56880 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN20P56880 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CLDN20P56880 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN20P56880 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.4■□□□□ 0.86
CLDN20P56880 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLDN20P56880 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN20P56880 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN20P56880 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN20P56880 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.39■□□□□ 0.85
CLDN20P56880 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CLDN20P56880 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.39■□□□□ 0.85
CLDN20P56880 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN20P56880 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN20P56880 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CLDN20P56880 AC009102.2-201ENST00000606772 1639 ntBASIC20.38■□□□□ 0.85
CLDN20P56880 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN20P56880 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.38■□□□□ 0.85
CLDN20P56880 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.38■□□□□ 0.85
CLDN20P56880 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CLDN20P56880 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN20P56880 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.38■□□□□ 0.85
CLDN20P56880 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN20P56880 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.37■□□□□ 0.85
CLDN20P56880 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.37■□□□□ 0.85
CLDN20P56880 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN20P56880 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.37■□□□□ 0.85
CLDN20P56880 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN20P56880 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN20P56880 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN20P56880 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN20P56880 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN20P56880 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN20P56880 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.36■□□□□ 0.85
CLDN20P56880 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.36■□□□□ 0.85
CLDN20P56880 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN20P56880 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.35■□□□□ 0.85
CLDN20P56880 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CLDN20P56880 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN20P56880 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN20P56880 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN20P56880 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN20P56880 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CLDN20P56880 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.35■□□□□ 0.85
CLDN20P56880 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN20P56880 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CLDN20P56880 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CLDN20P56880 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN20P56880 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN20P56880 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.35■□□□□ 0.85
CLDN20P56880 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN20P56880 LINC00565-201ENST00000562710 2331 ntBASIC20.35■□□□□ 0.85
CLDN20P56880 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN20P56880 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN20P56880 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN20P56880 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN20P56880 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.34■□□□□ 0.85
CLDN20P56880 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CLDN20P56880 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN20P56880 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.34■□□□□ 0.85
CLDN20P56880 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN20P56880 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN20P56880 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN20P56880 AL024507.2-201ENST00000606070 2574 ntBASIC20.34■□□□□ 0.85
CLDN20P56880 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.34■□□□□ 0.85
CLDN20P56880 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CLDN20P56880 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.33■□□□□ 0.85
CLDN20P56880 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN20P56880 SRD5A1P1-201ENST00000442297 786 ntBASIC20.33■□□□□ 0.85
CLDN20P56880 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CLDN20P56880 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.33■□□□□ 0.84
CLDN20P56880 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLDN20P56880 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLDN20P56880 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CLDN20P56880 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.32■□□□□ 0.84
CLDN20P56880 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN20P56880 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CLDN20P56880 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CLDN20P56880 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN20P56880 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN20P56880 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN20P56880 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.32■□□□□ 0.84
CLDN20P56880 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.32■□□□□ 0.84
CLDN20P56880 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN20P56880 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN20P56880 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN20P56880 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CLDN20P56880 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN20P56880 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDN20P56880 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CLDN20P56880 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN20P56880 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN20P56880 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN20P56880 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN20P56880 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN20P56880 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN20P56880 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms