Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC133637.1-201ENST00000624115 1537 ntBASIC20.02■□□□□ 0.79
CLDN18P56856 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.01■□□□□ 0.79
CLDN18P56856 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN18P56856 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN18P56856 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN18P56856 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN18P56856 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.01■□□□□ 0.79
CLDN18P56856 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN18P56856 AC091305.1-201ENST00000479476 895 ntBASIC20.01■□□□□ 0.79
CLDN18P56856 AC027682.1-201ENST00000562846 899 ntBASIC20.01■□□□□ 0.79
CLDN18P56856 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.01■□□□□ 0.79
CLDN18P56856 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN18P56856 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CLDN18P56856 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN18P56856 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN18P56856 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CLDN18P56856 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN18P56856 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20■□□□□ 0.79
CLDN18P56856 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20■□□□□ 0.79
CLDN18P56856 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20■□□□□ 0.79
CLDN18P56856 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN18P56856 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20■□□□□ 0.79
CLDN18P56856 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN18P56856 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN18P56856 AC008764.7-201ENST00000593779 1081 ntBASIC20■□□□□ 0.79
CLDN18P56856 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLDN18P56856 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20■□□□□ 0.79
CLDN18P56856 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CLDN18P56856 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN18P56856 RASA4CP-201ENST00000424092 1398 ntBASIC19.99■□□□□ 0.79
CLDN18P56856 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN18P56856 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.99■□□□□ 0.79
CLDN18P56856 BX842568.3-201ENST00000418104 571 ntBASIC19.99■□□□□ 0.79
CLDN18P56856 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.99■□□□□ 0.79
CLDN18P56856 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN18P56856 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN18P56856 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN18P56856 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN18P56856 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.99■□□□□ 0.79
CLDN18P56856 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN18P56856 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN18P56856 AC093323.1-202ENST00000635031 2045 ntBASIC19.98■□□□□ 0.79
CLDN18P56856 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.98■□□□□ 0.79
CLDN18P56856 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CLDN18P56856 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN18P56856 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN18P56856 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.98■□□□□ 0.79
CLDN18P56856 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.98■□□□□ 0.79
CLDN18P56856 AC233992.3-201ENST00000607491 485 ntBASIC19.98■□□□□ 0.79
CLDN18P56856 CA15P2-201ENST00000611168 834 ntBASIC19.98■□□□□ 0.79
CLDN18P56856 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN18P56856 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN18P56856 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CLDN18P56856 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.97■□□□□ 0.79
CLDN18P56856 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN18P56856 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.97■□□□□ 0.79
CLDN18P56856 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.97■□□□□ 0.79
CLDN18P56856 AC099791.1-201ENST00000416440 715 ntBASIC19.97■□□□□ 0.79
CLDN18P56856 ZNRF2P3-201ENST00000424200 374 ntBASIC19.97■□□□□ 0.79
CLDN18P56856 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.97■□□□□ 0.79
CLDN18P56856 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN18P56856 AL353803.4-201ENST00000565882 1934 ntBASIC19.97■□□□□ 0.79
CLDN18P56856 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN18P56856 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN18P56856 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN18P56856 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.96■□□□□ 0.79
CLDN18P56856 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CLDN18P56856 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN18P56856 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN18P56856 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN18P56856 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
CLDN18P56856 AC105265.2-201ENST00000467189 838 ntBASIC19.96■□□□□ 0.79
CLDN18P56856 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN18P56856 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.96■□□□□ 0.79
CLDN18P56856 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CLDN18P56856 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.96■□□□□ 0.79
CLDN18P56856 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN18P56856 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CLDN18P56856 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CLDN18P56856 SLC47A1P1-202ENST00000449666 945 ntBASIC19.95■□□□□ 0.78
CLDN18P56856 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CLDN18P56856 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CLDN18P56856 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN18P56856 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN18P56856 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN18P56856 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.94■□□□□ 0.78
CLDN18P56856 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.94■□□□□ 0.78
CLDN18P56856 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.94■□□□□ 0.78
CLDN18P56856 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.94■□□□□ 0.78
CLDN18P56856 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CLDN18P56856 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.94■□□□□ 0.78
CLDN18P56856 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CLDN18P56856 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN18P56856 ANOS2P-203ENST00000472227 1816 ntBASIC19.93■□□□□ 0.78
CLDN18P56856 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN18P56856 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CLDN18P56856 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CLDN18P56856 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.93■□□□□ 0.78
CLDN18P56856 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.93■□□□□ 0.78
CLDN18P56856 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms