Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC25A1P53007 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC25A1P53007 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SLC25A1P53007 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.86■□□□□ 0.77
SLC25A1P53007 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.86■□□□□ 0.77
SLC25A1P53007 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC25A1P53007 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.85■□□□□ 0.77
SLC25A1P53007 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC25A1P53007 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SLC25A1P53007 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC25A1P53007 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC25A1P53007 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC25A1P53007 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.85■□□□□ 0.77
SLC25A1P53007 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.85■□□□□ 0.77
SLC25A1P53007 AL031848.2-201ENST00000607670 837 ntBASIC19.85■□□□□ 0.77
SLC25A1P53007 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.85■□□□□ 0.77
SLC25A1P53007 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.85■□□□□ 0.77
SLC25A1P53007 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC25A1P53007 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.85■□□□□ 0.77
SLC25A1P53007 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC25A1P53007 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC25A1P53007 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SLC25A1P53007 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC25A1P53007 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC25A1P53007 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.84■□□□□ 0.77
SLC25A1P53007 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.84■□□□□ 0.77
SLC25A1P53007 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC25A1P53007 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SLC25A1P53007 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC25A1P53007 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.84■□□□□ 0.77
SLC25A1P53007 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.84■□□□□ 0.77
SLC25A1P53007 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.84■□□□□ 0.77
SLC25A1P53007 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC25A1P53007 LINC00565-201ENST00000562710 2331 ntBASIC19.84■□□□□ 0.77
SLC25A1P53007 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC25A1P53007 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC25A1P53007 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
SLC25A1P53007 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
SLC25A1P53007 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC25A1P53007 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC25A1P53007 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC25A1P53007 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC25A1P53007 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC25A1P53007 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SLC25A1P53007 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC25A1P53007 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC25A1P53007 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC25A1P53007 AC005703.6-201ENST00000623265 1329 ntBASIC19.82■□□□□ 0.76
SLC25A1P53007 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
SLC25A1P53007 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.82■□□□□ 0.76
SLC25A1P53007 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SLC25A1P53007 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC25A1P53007 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC25A1P53007 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC25A1P53007 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SLC25A1P53007 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC25A1P53007 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC25A1P53007 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.81■□□□□ 0.76
SLC25A1P53007 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC25A1P53007 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC25A1P53007 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC25A1P53007 AC021242.3-201ENST00000607598 1377 ntBASIC19.81■□□□□ 0.76
SLC25A1P53007 FP325331.1-202ENST00000623531 1380 ntBASIC19.81■□□□□ 0.76
SLC25A1P53007 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC25A1P53007 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC25A1P53007 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC25A1P53007 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC25A1P53007 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC25A1P53007 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SLC25A1P53007 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC25A1P53007 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC25A1P53007 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SLC25A1P53007 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC25A1P53007 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC25A1P53007 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC25A1P53007 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC25A1P53007 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC25A1P53007 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC25A1P53007 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SLC25A1P53007 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC25A1P53007 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC25A1P53007 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC25A1P53007 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
SLC25A1P53007 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC25A1P53007 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC25A1P53007 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC25A1P53007 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC25A1P53007 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC25A1P53007 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC25A1P53007 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC25A1P53007 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SLC25A1P53007 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC25A1P53007 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC25A1P53007 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC25A1P53007 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC25A1P53007 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
SLC25A1P53007 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC25A1P53007 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC25A1P53007 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC25A1P53007 LINC01529-204ENST00000636474 1715 ntBASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms