Protein–RNA interactions for Protein: P0C7T8

TMEM253, Transmembrane protein 253, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253P0C7T8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TMEM253P0C7T8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
TMEM253P0C7T8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TMEM253P0C7T8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.65■■□□□ 1.38
TMEM253P0C7T8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TMEM253P0C7T8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TMEM253P0C7T8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.65■■□□□ 1.38
TMEM253P0C7T8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
TMEM253P0C7T8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TMEM253P0C7T8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
TMEM253P0C7T8 LINC00565-201ENST00000562710 2331 ntBASIC23.65■■□□□ 1.38
TMEM253P0C7T8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.65■■□□□ 1.38
TMEM253P0C7T8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.65■■□□□ 1.38
TMEM253P0C7T8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TMEM253P0C7T8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
TMEM253P0C7T8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TMEM253P0C7T8 MIR6722-201ENST00000617286 78 ntBASIC23.64■■□□□ 1.37
TMEM253P0C7T8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.64■■□□□ 1.37
TMEM253P0C7T8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TMEM253P0C7T8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.64■■□□□ 1.37
TMEM253P0C7T8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
TMEM253P0C7T8 AC021242.3-201ENST00000607598 1377 ntBASIC23.64■■□□□ 1.37
TMEM253P0C7T8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TMEM253P0C7T8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TMEM253P0C7T8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM253P0C7T8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM253P0C7T8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM253P0C7T8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.63■■□□□ 1.37
TMEM253P0C7T8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM253P0C7T8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM253P0C7T8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM253P0C7T8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM253P0C7T8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TMEM253P0C7T8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
TMEM253P0C7T8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
TMEM253P0C7T8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.62■■□□□ 1.37
TMEM253P0C7T8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
TMEM253P0C7T8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TMEM253P0C7T8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.62■■□□□ 1.37
TMEM253P0C7T8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TMEM253P0C7T8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
TMEM253P0C7T8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
TMEM253P0C7T8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TMEM253P0C7T8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
TMEM253P0C7T8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.61■■□□□ 1.37
TMEM253P0C7T8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.61■■□□□ 1.37
TMEM253P0C7T8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.61■■□□□ 1.37
TMEM253P0C7T8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TMEM253P0C7T8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TMEM253P0C7T8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TMEM253P0C7T8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TMEM253P0C7T8 AC005703.6-201ENST00000623265 1329 ntBASIC23.6■■□□□ 1.37
TMEM253P0C7T8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TMEM253P0C7T8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
TMEM253P0C7T8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TMEM253P0C7T8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TMEM253P0C7T8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TMEM253P0C7T8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
TMEM253P0C7T8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.59■■□□□ 1.37
TMEM253P0C7T8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TMEM253P0C7T8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TMEM253P0C7T8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TMEM253P0C7T8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TMEM253P0C7T8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.59■■□□□ 1.37
TMEM253P0C7T8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TMEM253P0C7T8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
TMEM253P0C7T8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TMEM253P0C7T8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.59■■□□□ 1.37
TMEM253P0C7T8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
TMEM253P0C7T8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
TMEM253P0C7T8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TMEM253P0C7T8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TMEM253P0C7T8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TMEM253P0C7T8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.58■■□□□ 1.37
TMEM253P0C7T8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TMEM253P0C7T8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TMEM253P0C7T8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TMEM253P0C7T8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TMEM253P0C7T8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TMEM253P0C7T8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TMEM253P0C7T8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.57■■□□□ 1.36
TMEM253P0C7T8 CLDN5-201ENST00000403084 2357 ntBASIC23.57■■□□□ 1.36
TMEM253P0C7T8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.57■■□□□ 1.36
TMEM253P0C7T8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TMEM253P0C7T8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
TMEM253P0C7T8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TMEM253P0C7T8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.57■■□□□ 1.36
TMEM253P0C7T8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TMEM253P0C7T8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.57■■□□□ 1.36
TMEM253P0C7T8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.57■■□□□ 1.36
TMEM253P0C7T8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.57■■□□□ 1.36
TMEM253P0C7T8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TMEM253P0C7T8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TMEM253P0C7T8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TMEM253P0C7T8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TMEM253P0C7T8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TMEM253P0C7T8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TMEM253P0C7T8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.56■■□□□ 1.36
TMEM253P0C7T8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
TMEM253P0C7T8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms