Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DQA2P01906 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
HLA-DQA2P01906 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
HLA-DQA2P01906 AC079630.1-202ENST00000618127 1840 ntBASIC19.96■□□□□ 0.79
HLA-DQA2P01906 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DQA2P01906 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DQA2P01906 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DQA2P01906 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DQA2P01906 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
HLA-DQA2P01906 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
HLA-DQA2P01906 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.95■□□□□ 0.78
HLA-DQA2P01906 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA2P01906 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA2P01906 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA2P01906 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA2P01906 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA2P01906 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
HLA-DQA2P01906 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA2P01906 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA2P01906 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.95■□□□□ 0.78
HLA-DQA2P01906 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
HLA-DQA2P01906 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.95■□□□□ 0.78
HLA-DQA2P01906 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.95■□□□□ 0.78
HLA-DQA2P01906 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.95■□□□□ 0.78
HLA-DQA2P01906 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA2P01906 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA2P01906 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA2P01906 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA2P01906 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.95■□□□□ 0.78
HLA-DQA2P01906 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.95■□□□□ 0.78
HLA-DQA2P01906 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA2P01906 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA2P01906 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HLA-DQA2P01906 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQA2P01906 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQA2P01906 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQA2P01906 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.94■□□□□ 0.78
HLA-DQA2P01906 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.94■□□□□ 0.78
HLA-DQA2P01906 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.94■□□□□ 0.78
HLA-DQA2P01906 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.94■□□□□ 0.78
HLA-DQA2P01906 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.94■□□□□ 0.78
HLA-DQA2P01906 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.94■□□□□ 0.78
HLA-DQA2P01906 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQA2P01906 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
HLA-DQA2P01906 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQA2P01906 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HLA-DQA2P01906 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.93■□□□□ 0.78
HLA-DQA2P01906 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DQA2P01906 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.93■□□□□ 0.78
HLA-DQA2P01906 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.93■□□□□ 0.78
HLA-DQA2P01906 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.93■□□□□ 0.78
HLA-DQA2P01906 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DQA2P01906 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
HLA-DQA2P01906 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DQA2P01906 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HLA-DQA2P01906 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DQA2P01906 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.92■□□□□ 0.78
HLA-DQA2P01906 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.92■□□□□ 0.78
HLA-DQA2P01906 AL117328.2-201ENST00000624617 1940 ntBASIC19.92■□□□□ 0.78
HLA-DQA2P01906 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQA2P01906 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.92■□□□□ 0.78
HLA-DQA2P01906 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.92■□□□□ 0.78
HLA-DQA2P01906 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
HLA-DQA2P01906 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQA2P01906 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQA2P01906 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.92■□□□□ 0.78
HLA-DQA2P01906 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQA2P01906 SNX5-217ENST00000606557 1087 ntBASIC19.92■□□□□ 0.78
HLA-DQA2P01906 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQA2P01906 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.92■□□□□ 0.78
HLA-DQA2P01906 AC079834.2-201ENST00000609776 1949 ntBASIC19.92■□□□□ 0.78
HLA-DQA2P01906 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQA2P01906 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQA2P01906 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQA2P01906 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQA2P01906 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQA2P01906 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQA2P01906 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQA2P01906 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.91■□□□□ 0.78
HLA-DQA2P01906 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.91■□□□□ 0.78
HLA-DQA2P01906 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQA2P01906 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.91■□□□□ 0.78
HLA-DQA2P01906 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.91■□□□□ 0.78
HLA-DQA2P01906 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQA2P01906 AC137630.3-201ENST00000607245 391 ntBASIC19.91■□□□□ 0.78
HLA-DQA2P01906 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.91■□□□□ 0.78
HLA-DQA2P01906 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQA2P01906 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQA2P01906 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
HLA-DQA2P01906 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
HLA-DQA2P01906 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQA2P01906 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQA2P01906 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQA2P01906 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQA2P01906 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
HLA-DQA2P01906 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQA2P01906 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
HLA-DQA2P01906 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.9■□□□□ 0.78
HLA-DQA2P01906 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQA2P01906 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms