Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.4■□□□□ 0.38
TOMM40O96008 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOMM40O96008 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOMM40O96008 YBX1P4-201ENST00000392794 808 ntBASIC17.4■□□□□ 0.38
TOMM40O96008 AL033527.3-201ENST00000566366 1196 ntBASIC17.4■□□□□ 0.38
TOMM40O96008 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.4■□□□□ 0.38
TOMM40O96008 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOMM40O96008 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.4■□□□□ 0.38
TOMM40O96008 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOMM40O96008 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOMM40O96008 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
TOMM40O96008 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TOMM40O96008 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TOMM40O96008 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOMM40O96008 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.4■□□□□ 0.38
TOMM40O96008 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.39■□□□□ 0.38
TOMM40O96008 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
TOMM40O96008 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TOMM40O96008 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
TOMM40O96008 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TOMM40O96008 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TOMM40O96008 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TOMM40O96008 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TOMM40O96008 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TOMM40O96008 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TOMM40O96008 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TOMM40O96008 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TOMM40O96008 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TOMM40O96008 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TOMM40O96008 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOMM40O96008 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOMM40O96008 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOMM40O96008 AC103834.1-201ENST00000520383 144 ntBASIC17.38■□□□□ 0.37
TOMM40O96008 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.38■□□□□ 0.37
TOMM40O96008 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOMM40O96008 SNX5-217ENST00000606557 1087 ntBASIC17.38■□□□□ 0.37
TOMM40O96008 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOMM40O96008 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOMM40O96008 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOMM40O96008 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOMM40O96008 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TOMM40O96008 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
TOMM40O96008 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TOMM40O96008 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TOMM40O96008 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TOMM40O96008 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TOMM40O96008 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
TOMM40O96008 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TOMM40O96008 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.37■□□□□ 0.37
TOMM40O96008 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.37■□□□□ 0.37
TOMM40O96008 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TOMM40O96008 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
TOMM40O96008 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.37■□□□□ 0.37
TOMM40O96008 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.37■□□□□ 0.37
TOMM40O96008 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TOMM40O96008 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TOMM40O96008 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TOMM40O96008 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TOMM40O96008 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.36■□□□□ 0.37
TOMM40O96008 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TOMM40O96008 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TOMM40O96008 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TOMM40O96008 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TOMM40O96008 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TOMM40O96008 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TOMM40O96008 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
TOMM40O96008 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TOMM40O96008 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TOMM40O96008 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.36■□□□□ 0.37
TOMM40O96008 AC103724.3-201ENST00000564481 992 ntBASIC17.36■□□□□ 0.37
TOMM40O96008 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.36■□□□□ 0.37
TOMM40O96008 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TOMM40O96008 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TOMM40O96008 KRT8P33-201ENST00000508125 1423 ntBASIC17.36■□□□□ 0.37
TOMM40O96008 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TOMM40O96008 RNF165-205ENST00000588679 2904 ntBASIC17.36■□□□□ 0.37
TOMM40O96008 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.36■□□□□ 0.37
TOMM40O96008 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TOMM40O96008 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TOMM40O96008 LINC00526-201ENST00000581067 1875 ntBASIC17.35■□□□□ 0.37
TOMM40O96008 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TOMM40O96008 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TOMM40O96008 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.35■□□□□ 0.37
TOMM40O96008 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.35■□□□□ 0.37
TOMM40O96008 AC137630.3-201ENST00000607245 391 ntBASIC17.35■□□□□ 0.37
TOMM40O96008 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.35■□□□□ 0.37
TOMM40O96008 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.35■□□□□ 0.37
TOMM40O96008 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TOMM40O96008 ESRRAP2-201ENST00000418437 1549 ntBASIC17.35■□□□□ 0.37
TOMM40O96008 AC127496.7-201ENST00000625110 1798 ntBASIC17.35■□□□□ 0.37
TOMM40O96008 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TOMM40O96008 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TOMM40O96008 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TOMM40O96008 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TOMM40O96008 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TOMM40O96008 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.34■□□□□ 0.37
TOMM40O96008 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TOMM40O96008 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TOMM40O96008 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TOMM40O96008 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms