Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.82■□□□□ 0.44
NDUFA3O95167 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
NDUFA3O95167 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NDUFA3O95167 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NDUFA3O95167 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.81■□□□□ 0.44
NDUFA3O95167 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFA3O95167 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFA3O95167 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.81■□□□□ 0.44
NDUFA3O95167 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFA3O95167 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFA3O95167 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NDUFA3O95167 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.81■□□□□ 0.44
NDUFA3O95167 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFA3O95167 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFA3O95167 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NDUFA3O95167 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
NDUFA3O95167 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.8■□□□□ 0.44
NDUFA3O95167 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.8■□□□□ 0.44
NDUFA3O95167 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFA3O95167 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFA3O95167 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFA3O95167 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
NDUFA3O95167 AL512631.2-201ENST00000604634 923 ntBASIC17.8■□□□□ 0.44
NDUFA3O95167 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.8■□□□□ 0.44
NDUFA3O95167 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.8■□□□□ 0.44
NDUFA3O95167 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFA3O95167 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFA3O95167 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFA3O95167 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFA3O95167 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFA3O95167 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
NDUFA3O95167 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFA3O95167 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
NDUFA3O95167 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.79■□□□□ 0.44
NDUFA3O95167 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.79■□□□□ 0.44
NDUFA3O95167 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.79■□□□□ 0.44
NDUFA3O95167 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.79■□□□□ 0.44
NDUFA3O95167 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFA3O95167 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.79■□□□□ 0.44
NDUFA3O95167 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFA3O95167 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.79■□□□□ 0.44
NDUFA3O95167 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.79■□□□□ 0.44
NDUFA3O95167 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFA3O95167 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.78■□□□□ 0.44
NDUFA3O95167 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFA3O95167 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.78■□□□□ 0.44
NDUFA3O95167 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.78■□□□□ 0.44
NDUFA3O95167 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
NDUFA3O95167 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.78■□□□□ 0.44
NDUFA3O95167 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.78■□□□□ 0.44
NDUFA3O95167 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.78■□□□□ 0.44
NDUFA3O95167 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.78■□□□□ 0.44
NDUFA3O95167 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.78■□□□□ 0.44
NDUFA3O95167 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.78■□□□□ 0.44
NDUFA3O95167 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.78■□□□□ 0.44
NDUFA3O95167 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.78■□□□□ 0.44
NDUFA3O95167 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFA3O95167 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFA3O95167 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFA3O95167 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.78■□□□□ 0.44
NDUFA3O95167 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.78■□□□□ 0.44
NDUFA3O95167 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.77■□□□□ 0.44
NDUFA3O95167 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
NDUFA3O95167 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NDUFA3O95167 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.77■□□□□ 0.44
NDUFA3O95167 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFA3O95167 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.77■□□□□ 0.44
NDUFA3O95167 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.77■□□□□ 0.44
NDUFA3O95167 AC241377.3-202ENST00000626088 1088 ntBASIC17.77■□□□□ 0.44
NDUFA3O95167 AC241585.3-202ENST00000628937 1088 ntBASIC17.77■□□□□ 0.44
NDUFA3O95167 AC245100.8-202ENST00000629247 1058 ntBASIC17.77■□□□□ 0.44
NDUFA3O95167 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NDUFA3O95167 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.77■□□□□ 0.44
NDUFA3O95167 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
NDUFA3O95167 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NDUFA3O95167 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
NDUFA3O95167 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDUFA3O95167 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.76■□□□□ 0.43
NDUFA3O95167 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NDUFA3O95167 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDUFA3O95167 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.76■□□□□ 0.43
NDUFA3O95167 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NDUFA3O95167 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.76■□□□□ 0.43
NDUFA3O95167 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.76■□□□□ 0.43
NDUFA3O95167 AC009086.3-201ENST00000623486 1008 ntBASIC17.76■□□□□ 0.43
NDUFA3O95167 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDUFA3O95167 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NDUFA3O95167 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDUFA3O95167 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.75■□□□□ 0.43
NDUFA3O95167 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NDUFA3O95167 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.75■□□□□ 0.43
NDUFA3O95167 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.75■□□□□ 0.43
NDUFA3O95167 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.75■□□□□ 0.43
NDUFA3O95167 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDUFA3O95167 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.75■□□□□ 0.43
NDUFA3O95167 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.75■□□□□ 0.43
NDUFA3O95167 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDUFA3O95167 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.75■□□□□ 0.43
NDUFA3O95167 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDUFA3O95167 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms