Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF254O75437 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNF254O75437 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF254O75437 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNF254O75437 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.71■□□□□ 0.75
ZNF254O75437 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
ZNF254O75437 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ZNF254O75437 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF254O75437 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.7■□□□□ 0.74
ZNF254O75437 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.7■□□□□ 0.74
ZNF254O75437 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF254O75437 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF254O75437 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
ZNF254O75437 AC012354.3-201ENST00000623734 483 ntBASIC19.7■□□□□ 0.74
ZNF254O75437 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
ZNF254O75437 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.7■□□□□ 0.74
ZNF254O75437 ESRRAP2-201ENST00000418437 1549 ntBASIC19.7■□□□□ 0.74
ZNF254O75437 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF254O75437 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ZNF254O75437 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF254O75437 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF254O75437 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF254O75437 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF254O75437 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF254O75437 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF254O75437 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ZNF254O75437 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF254O75437 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF254O75437 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF254O75437 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ZNF254O75437 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF254O75437 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF254O75437 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF254O75437 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.69■□□□□ 0.74
ZNF254O75437 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF254O75437 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF254O75437 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF254O75437 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.68■□□□□ 0.74
ZNF254O75437 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ZNF254O75437 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF254O75437 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF254O75437 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF254O75437 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF254O75437 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF254O75437 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF254O75437 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.68■□□□□ 0.74
ZNF254O75437 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.68■□□□□ 0.74
ZNF254O75437 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ZNF254O75437 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ZNF254O75437 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF254O75437 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF254O75437 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF254O75437 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF254O75437 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF254O75437 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF254O75437 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF254O75437 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
ZNF254O75437 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF254O75437 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ZNF254O75437 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF254O75437 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.66■□□□□ 0.74
ZNF254O75437 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF254O75437 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
ZNF254O75437 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
ZNF254O75437 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF254O75437 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ZNF254O75437 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF254O75437 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.65■□□□□ 0.74
ZNF254O75437 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ZNF254O75437 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.65■□□□□ 0.74
ZNF254O75437 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF254O75437 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.65■□□□□ 0.74
ZNF254O75437 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF254O75437 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.65■□□□□ 0.74
ZNF254O75437 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.65■□□□□ 0.74
ZNF254O75437 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.65■□□□□ 0.74
ZNF254O75437 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF254O75437 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF254O75437 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF254O75437 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF254O75437 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.65■□□□□ 0.74
ZNF254O75437 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
ZNF254O75437 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF254O75437 YBX1P4-201ENST00000392794 808 ntBASIC19.64■□□□□ 0.73
ZNF254O75437 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.64■□□□□ 0.73
ZNF254O75437 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ZNF254O75437 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.64■□□□□ 0.73
ZNF254O75437 SNX5-217ENST00000606557 1087 ntBASIC19.64■□□□□ 0.73
ZNF254O75437 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
ZNF254O75437 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ZNF254O75437 AC242852.2-201ENST00000615738 1807 ntBASIC19.64■□□□□ 0.73
ZNF254O75437 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.64■□□□□ 0.73
ZNF254O75437 AL121603.2-201ENST00000557373 2117 ntBASIC19.64■□□□□ 0.73
ZNF254O75437 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF254O75437 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF254O75437 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF254O75437 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF254O75437 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF254O75437 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF254O75437 AL353803.4-201ENST00000565882 1934 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms