Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PPM1DO15297 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PPM1DO15297 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PPM1DO15297 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.76■■□□□ 1.07
PPM1DO15297 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PPM1DO15297 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.76■■□□□ 1.07
PPM1DO15297 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PPM1DO15297 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PPM1DO15297 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PPM1DO15297 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PPM1DO15297 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PPM1DO15297 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.75■■□□□ 1.07
PPM1DO15297 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.75■■□□□ 1.07
PPM1DO15297 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PPM1DO15297 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PPM1DO15297 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PPM1DO15297 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.75■■□□□ 1.07
PPM1DO15297 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PPM1DO15297 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PPM1DO15297 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PPM1DO15297 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PPM1DO15297 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PPM1DO15297 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PPM1DO15297 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PPM1DO15297 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PPM1DO15297 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
PPM1DO15297 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PPM1DO15297 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPM1DO15297 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PPM1DO15297 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPM1DO15297 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PPM1DO15297 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.73■■□□□ 1.07
PPM1DO15297 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PPM1DO15297 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PPM1DO15297 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPM1DO15297 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPM1DO15297 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PPM1DO15297 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PPM1DO15297 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.72■■□□□ 1.07
PPM1DO15297 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.72■■□□□ 1.07
PPM1DO15297 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PPM1DO15297 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PPM1DO15297 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.72■■□□□ 1.07
PPM1DO15297 FP325331.1-202ENST00000623531 1380 ntBASIC21.72■■□□□ 1.07
PPM1DO15297 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PPM1DO15297 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.71■■□□□ 1.07
PPM1DO15297 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PPM1DO15297 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PPM1DO15297 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
PPM1DO15297 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PPM1DO15297 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.71■■□□□ 1.07
PPM1DO15297 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PPM1DO15297 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.71■■□□□ 1.07
PPM1DO15297 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PPM1DO15297 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.07
PPM1DO15297 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
PPM1DO15297 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PPM1DO15297 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PPM1DO15297 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PPM1DO15297 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
PPM1DO15297 IRS3P-201ENST00000223076 1006 ntBASIC21.7■■□□□ 1.06
PPM1DO15297 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
PPM1DO15297 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.7■■□□□ 1.06
PPM1DO15297 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.7■■□□□ 1.06
PPM1DO15297 AL499627.2-201ENST00000606283 725 ntBASIC21.7■■□□□ 1.06
PPM1DO15297 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PPM1DO15297 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PPM1DO15297 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.7■■□□□ 1.06
PPM1DO15297 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PPM1DO15297 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.7■■□□□ 1.06
PPM1DO15297 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PPM1DO15297 AC133637.1-201ENST00000624115 1537 ntBASIC21.7■■□□□ 1.06
PPM1DO15297 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PPM1DO15297 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PPM1DO15297 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.69■■□□□ 1.06
PPM1DO15297 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.69■■□□□ 1.06
PPM1DO15297 SLC47A1P1-202ENST00000449666 945 ntBASIC21.69■■□□□ 1.06
PPM1DO15297 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PPM1DO15297 DUX4L4-201ENST00000566884 1269 ntBASIC21.69■■□□□ 1.06
PPM1DO15297 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.69■■□□□ 1.06
PPM1DO15297 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.69■■□□□ 1.06
PPM1DO15297 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.68■■□□□ 1.06
PPM1DO15297 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.68■■□□□ 1.06
PPM1DO15297 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.68■■□□□ 1.06
PPM1DO15297 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PPM1DO15297 AC126544.1-201ENST00000580842 1059 ntBASIC21.68■■□□□ 1.06
PPM1DO15297 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PPM1DO15297 AC144652.1-201ENST00000609974 1624 ntBASIC21.68■■□□□ 1.06
PPM1DO15297 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PPM1DO15297 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PPM1DO15297 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PPM1DO15297 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PPM1DO15297 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PPM1DO15297 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PPM1DO15297 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PPM1DO15297 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PPM1DO15297 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
PPM1DO15297 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PPM1DO15297 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.67■■□□□ 1.06
PPM1DO15297 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms