Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 HPN-208ENST00000600390 564 ntTSL 422.17■■□□□ 1.146e-6■■■□□ 15.2
NKRFO15226 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.626e-6■■■□□ 15.2
NKRFO15226 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.526e-6■■■□□ 15.2
NKRFO15226 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.47■□□□□ 0.236e-6■■■□□ 15.2
NKRFO15226 BCAR1-221ENST00000569006 574 ntTSL 417.23■□□□□ 0.353e-7■■■□□ 15.2
NKRFO15226 PTP4A3-205ENST00000523147 558 ntTSL 524.34■■□□□ 1.495e-7■■■□□ 15.2
NKRFO15226 AATK-AS1-202ENST00000571031 1488 ntTSL 1 (best)23.78■■□□□ 1.41e-7■■■□□ 15.2
NKRFO15226 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.161e-7■■■□□ 15.2
NKRFO15226 AATK-AS1-201ENST00000414089 1577 ntTSL 222.04■■□□□ 1.121e-7■■■□□ 15.2
NKRFO15226 ANKRD11-210ENST00000566858 580 ntTSL 418.7■□□□□ 0.586e-9■■■□□ 15.2
NKRFO15226 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.57■□□□□ 0.246e-9■■■□□ 15.2
NKRFO15226 ANKRD11-216ENST00000568924 587 ntTSL 415.82■□□□□ 0.126e-9■■■□□ 15.2
NKRFO15226 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.071e-6■■■□□ 15.2
NKRFO15226 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.272e-6■■■□□ 15.2
NKRFO15226 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.082e-6■■■□□ 15.2
NKRFO15226 PFKL-205ENST00000466134 5986 ntTSL 220.48■□□□□ 0.876e-7■■■□□ 15.2
NKRFO15226 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.776e-7■■■□□ 15.2
NKRFO15226 PFKL-202ENST00000397961 3390 ntTSL 1 (best)16.69■□□□□ 0.266e-7■■■□□ 15.2
NKRFO15226 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.513e-7■■■□□ 15.2
NKRFO15226 NEU4-214ENST00000476542 536 ntTSL 224.41■■□□□ 1.59e-7■■■□□ 15.2
NKRFO15226 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.682e-6■■■□□ 15.2
NKRFO15226 MACROD1-208ENST00000545464 899 ntTSL 328.84■■■□□ 2.212e-6■■■□□ 15.2
NKRFO15226 MACROD1-206ENST00000542359 459 ntTSL 318.19■□□□□ 0.52e-6■■■□□ 15.2
NKRFO15226 SEPT9-225ENST00000589250 527 ntTSL 210.95□□□□□ -0.661e-8■■■□□ 15.2
NKRFO15226 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.286e-6■■■□□ 15.2
NKRFO15226 MYH9-201ENST00000216181 7501 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.492e-6■■■□□ 15.2
NKRFO15226 CDK19-207ENST00000468997 1083 ntTSL 1 (best)16.85■□□□□ 0.292e-12■■■□□ 15.2
NKRFO15226 CDK19-204ENST00000457688 955 ntTSL 512.35□□□□□ -0.432e-12■■■□□ 15.2
NKRFO15226 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.093e-7■■■□□ 15.2
NKRFO15226 HIVEP1-209ENST00000627968 8924 ntTSL 5 BASIC12.51□□□□□ -0.412e-7■■■□□ 15.2
NKRFO15226 HIVEP1-208ENST00000541134 9023 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.422e-7■■■□□ 15.2
NKRFO15226 HIVEP1-201ENST00000379388 9027 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.422e-7■■■□□ 15.2
NKRFO15226 HIVEP1-206ENST00000487103 585 ntTSL 28.24□□□□□ -1.092e-7■■■□□ 15.2
NKRFO15226 HIVEP1-207ENST00000491710 579 ntTSL 38.07□□□□□ -1.122e-7■■■□□ 15.2
NKRFO15226 HAGH-209ENST00000567190 472 ntTSL 427.34■■□□□ 1.974e-8■■■□□ 15.2
NKRFO15226 FGFRL1-207ENST00000512562 335 ntTSL 418.41■□□□□ 0.544e-8■■■□□ 15.2
NKRFO15226 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.53e-19■■■□□ 15.2
NKRFO15226 HAGH-204ENST00000564445 864 ntTSL 317.73■□□□□ 0.434e-8■■■□□ 15.2
NKRFO15226 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.363e-19■■■□□ 15.2
NKRFO15226 EEF2-207ENST00000600794 352 ntTSL 310.77□□□□□ -0.694e-8■■■□□ 15.2
NKRFO15226 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.6■■□□□ 1.378e-7■■■□□ 15.2
NKRFO15226 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.6■■□□□ 1.378e-7■■■□□ 15.2
NKRFO15226 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.048e-7■■■□□ 15.2
NKRFO15226 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.02■□□□□ 0.968e-7■■■□□ 15.2
NKRFO15226 STK11-203ENST00000585748 746 ntTSL 315.4■□□□□ 0.066e-10■■■□□ 15.2
NKRFO15226 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.327e-7■■■□□ 15.1
NKRFO15226 FBRSL1-204ENST00000539264 409 ntTSL 227.63■■■□□ 2.014e-7■■■□□ 15.1
NKRFO15226 FBRSL1-207ENST00000543360 238 ntTSL 227.22■■□□□ 1.954e-7■■■□□ 15.1
NKRFO15226 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.774e-16■■■□□ 15.1
NKRFO15226 AL365205.1-202ENST00000487182 3043 ntTSL 214.23□□□□□ -0.134e-16■■■□□ 15.1
NKRFO15226 KIAA0368-205ENST00000602447 2806 ntAPPRIS ALT2 TSL 519.69■□□□□ 0.742e-14■■■□□ 15.1
NKRFO15226 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC12.94□□□□□ -0.342e-6■■■□□ 15.1
NKRFO15226 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.769e-7■■■□□ 15.1
NKRFO15226 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.41■□□□□ 0.863e-7■■■□□ 15.1
NKRFO15226 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.653e-7■■■□□ 15.1
NKRFO15226 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.643e-7■■■□□ 15.1
NKRFO15226 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.06■□□□□ 0.483e-7■■■□□ 15.1
NKRFO15226 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.43■□□□□ 0.383e-7■■■□□ 15.1
NKRFO15226 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.48■□□□□ 0.233e-7■■■□□ 15.1
NKRFO15226 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.043e-7■■■□□ 15.1
NKRFO15226 BCL9L-204ENST00000530293 445 ntTSL 510.58□□□□□ -0.724e-7■■■□□ 15.1
NKRFO15226 NAPB-206ENST00000487502 699 ntTSL 227.21■■□□□ 1.953e-8■■■□□ 15.1
NKRFO15226 NAPB-204ENST00000468128 782 ntTSL 525.5■■□□□ 1.673e-8■■■□□ 15.1
NKRFO15226 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.94□□□□□ -0.023e-8■■■□□ 15.1
NKRFO15226 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.153e-8■■■□□ 15.1
NKRFO15226 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.163e-8■■■□□ 15.1
NKRFO15226 NAPB-203ENST00000432543 3754 ntTSL 2 BASIC13.36□□□□□ -0.273e-8■■■□□ 15.1
NKRFO15226 NAPB-205ENST00000472855 1651 ntTSL 27.83□□□□□ -1.163e-8■■■□□ 15.1
NKRFO15226 PRR7-AS1-202ENST00000506465 421 ntTSL 37.35□□□□□ -1.232e-7■■■□□ 15.1
NKRFO15226 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.373e-6■■■□□ 15.1
NKRFO15226 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC24.48■■□□□ 1.513e-6■■■□□ 15.1
NKRFO15226 PLXNB2-205ENST00000432455 1620 ntTSL 520.24■□□□□ 0.831e-6■■■□□ 15
NKRFO15226 SLC12A4-213ENST00000573702 633 ntTSL 416.6■□□□□ 0.259e-17■■■□□ 15
NKRFO15226 SLC12A4-211ENST00000572766 515 ntTSL 414.95□□□□□ -0.029e-17■■■□□ 15
NKRFO15226 SLC12A4-214ENST00000574665 847 ntTSL 513.94□□□□□ -0.189e-17■■■□□ 15
NKRFO15226 VAPA-205ENST00000578314 532 ntTSL 326.65■■□□□ 1.862e-10■■■□□ 15
NKRFO15226 SHC2-206ENST00000590222 951 ntTSL 519.72■□□□□ 0.755e-7■■■□□ 15
NKRFO15226 TULP4-207ENST00000620026 680 ntTSL 424.51■■□□□ 1.512e-10■■■□□ 15
NKRFO15226 GREB1-210ENST00000628795 438 ntTSL 55.04□□□□□ -1.61e-6■■■□□ 15
NKRFO15226 MGAT4B-211ENST00000520019 831 ntTSL 325.73■■□□□ 1.713e-7■■■□□ 15
NKRFO15226 MGAT4B-212ENST00000520134 592 ntTSL 325.73■■□□□ 1.713e-7■■■□□ 15
NKRFO15226 MGAT4B-221ENST00000523108 1080 ntTSL 525.73■■□□□ 1.713e-7■■■□□ 15
NKRFO15226 MGAT4B-208ENST00000519616 522 ntTSL 524.98■■□□□ 1.593e-7■■■□□ 15
NKRFO15226 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.293e-7■■■□□ 15
NKRFO15226 MGAT4B-203ENST00000518168 1013 ntTSL 221.79■■□□□ 1.083e-7■■■□□ 15
NKRFO15226 MGAT4B-222ENST00000523329 543 ntTSL 319.27■□□□□ 0.683e-7■■■□□ 15
NKRFO15226 FOXN3-210ENST00000555658 648 ntTSL 34.88□□□□□ -1.631e-11■■■□□ 15
NKRFO15226 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.43■■□□□ 1.182e-7■■■□□ 15
NKRFO15226 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.152e-7■■■□□ 15
NKRFO15226 RAI1-203ENST00000471135 570 ntTSL 315.15■□□□□ 0.022e-6■■■□□ 15
NKRFO15226 PLXNB1-209ENST00000466353 626 ntTSL 321.65■■□□□ 1.064e-8■■■□□ 15
NKRFO15226 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.11e-6■■■□□ 15
NKRFO15226 SARDH-207ENST00000439388 3216 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.241e-6■■■□□ 15
NKRFO15226 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.971e-6■■■□□ 15
NKRFO15226 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.431e-6■■■□□ 15
NKRFO15226 ACVR2B-203ENST00000465020 1666 ntTSL 220.02■□□□□ 0.81e-6■■■□□ 15
NKRFO15226 ACVR2B-201ENST00000352511 11821 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.681e-6■■■□□ 15
NKRFO15226 NEU4-206ENST00000415936 860 ntTSL 321.07■□□□□ 0.961e-6■■■□□ 15
NKRFO15226 NEU4-208ENST00000423583 753 ntTSL 520.34■□□□□ 0.851e-6■■■□□ 15
NKRFO15226 DEAF1-206ENST00000526857 567 ntTSL 315.92■□□□□ 0.147e-8■■■□□ 15
Retrieved 100 of 9,198 protein–RNA pairs in 143.6 ms