Protein–RNA interactions for Protein: A6NKX1

FAM223B, Protein FAM223B, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM223BA6NKX1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
FAM223BA6NKX1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
FAM223BA6NKX1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FAM223BA6NKX1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
FAM223BA6NKX1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FAM223BA6NKX1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.36■□□□□ 0.37
FAM223BA6NKX1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.36■□□□□ 0.37
FAM223BA6NKX1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.36■□□□□ 0.37
FAM223BA6NKX1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.36■□□□□ 0.37
FAM223BA6NKX1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FAM223BA6NKX1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
FAM223BA6NKX1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
FAM223BA6NKX1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FAM223BA6NKX1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.35■□□□□ 0.37
FAM223BA6NKX1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
FAM223BA6NKX1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FAM223BA6NKX1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FAM223BA6NKX1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FAM223BA6NKX1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FAM223BA6NKX1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.35■□□□□ 0.37
FAM223BA6NKX1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.35■□□□□ 0.37
FAM223BA6NKX1 AL512631.2-201ENST00000604634 923 ntBASIC17.35■□□□□ 0.37
FAM223BA6NKX1 AC131212.1-201ENST00000613771 668 ntBASIC17.35■□□□□ 0.37
FAM223BA6NKX1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.35■□□□□ 0.37
FAM223BA6NKX1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.35■□□□□ 0.37
FAM223BA6NKX1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.35■□□□□ 0.37
FAM223BA6NKX1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
FAM223BA6NKX1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
FAM223BA6NKX1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FAM223BA6NKX1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FAM223BA6NKX1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FAM223BA6NKX1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FAM223BA6NKX1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.34■□□□□ 0.37
FAM223BA6NKX1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.34■□□□□ 0.37
FAM223BA6NKX1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FAM223BA6NKX1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FAM223BA6NKX1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
FAM223BA6NKX1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.34■□□□□ 0.37
FAM223BA6NKX1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
FAM223BA6NKX1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FAM223BA6NKX1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
FAM223BA6NKX1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.33■□□□□ 0.37
FAM223BA6NKX1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FAM223BA6NKX1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.33■□□□□ 0.36
FAM223BA6NKX1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FAM223BA6NKX1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.33■□□□□ 0.36
FAM223BA6NKX1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.33■□□□□ 0.36
FAM223BA6NKX1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM223BA6NKX1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM223BA6NKX1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FAM223BA6NKX1 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.33■□□□□ 0.36
FAM223BA6NKX1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FAM223BA6NKX1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
FAM223BA6NKX1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM223BA6NKX1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FAM223BA6NKX1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.33■□□□□ 0.36
FAM223BA6NKX1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM223BA6NKX1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.33■□□□□ 0.36
FAM223BA6NKX1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.33■□□□□ 0.36
FAM223BA6NKX1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM223BA6NKX1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.33■□□□□ 0.36
FAM223BA6NKX1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.32■□□□□ 0.36
FAM223BA6NKX1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
FAM223BA6NKX1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM223BA6NKX1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.32■□□□□ 0.36
FAM223BA6NKX1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FAM223BA6NKX1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM223BA6NKX1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM223BA6NKX1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM223BA6NKX1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FAM223BA6NKX1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
FAM223BA6NKX1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM223BA6NKX1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FAM223BA6NKX1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
FAM223BA6NKX1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.31■□□□□ 0.36
FAM223BA6NKX1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
FAM223BA6NKX1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.31■□□□□ 0.36
FAM223BA6NKX1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
FAM223BA6NKX1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM223BA6NKX1 AC131281.2-201ENST00000520478 145 ntBASIC17.31■□□□□ 0.36
FAM223BA6NKX1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.31■□□□□ 0.36
FAM223BA6NKX1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.31■□□□□ 0.36
FAM223BA6NKX1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FAM223BA6NKX1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FAM223BA6NKX1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.31■□□□□ 0.36
FAM223BA6NKX1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
FAM223BA6NKX1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FAM223BA6NKX1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM223BA6NKX1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM223BA6NKX1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FAM223BA6NKX1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
FAM223BA6NKX1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FAM223BA6NKX1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FAM223BA6NKX1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FAM223BA6NKX1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FAM223BA6NKX1 DUX4L19-201ENST00000557448 1267 ntBASIC17.3■□□□□ 0.36
FAM223BA6NKX1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FAM223BA6NKX1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.3■□□□□ 0.36
FAM223BA6NKX1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FAM223BA6NKX1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms