Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.61■□□□□ 0.41
RBFOX3A6NFN3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RBFOX3A6NFN3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RBFOX3A6NFN3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RBFOX3A6NFN3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RBFOX3A6NFN3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RBFOX3A6NFN3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RBFOX3A6NFN3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RBFOX3A6NFN3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RBFOX3A6NFN3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RBFOX3A6NFN3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RBFOX3A6NFN3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
RBFOX3A6NFN3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RBFOX3A6NFN3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RBFOX3A6NFN3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RBFOX3A6NFN3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RBFOX3A6NFN3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC17.6■□□□□ 0.41
RBFOX3A6NFN3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RBFOX3A6NFN3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RBFOX3A6NFN3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RBFOX3A6NFN3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RBFOX3A6NFN3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RBFOX3A6NFN3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RBFOX3A6NFN3 AC005229.4-201ENST00000610085 2198 ntBASIC17.6■□□□□ 0.41
RBFOX3A6NFN3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.6■□□□□ 0.41
RBFOX3A6NFN3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RBFOX3A6NFN3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RBFOX3A6NFN3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RBFOX3A6NFN3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RBFOX3A6NFN3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.59■□□□□ 0.41
RBFOX3A6NFN3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RBFOX3A6NFN3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.59■□□□□ 0.41
RBFOX3A6NFN3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RBFOX3A6NFN3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RBFOX3A6NFN3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC17.59■□□□□ 0.41
RBFOX3A6NFN3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RBFOX3A6NFN3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RBFOX3A6NFN3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
RBFOX3A6NFN3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RBFOX3A6NFN3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RBFOX3A6NFN3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RBFOX3A6NFN3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
RBFOX3A6NFN3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.58■□□□□ 0.41
RBFOX3A6NFN3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RBFOX3A6NFN3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
RBFOX3A6NFN3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
RBFOX3A6NFN3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RBFOX3A6NFN3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RBFOX3A6NFN3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.58■□□□□ 0.4
RBFOX3A6NFN3 AL162393.1-201ENST00000437852 946 ntBASIC17.58■□□□□ 0.4
RBFOX3A6NFN3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.58■□□□□ 0.4
RBFOX3A6NFN3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
RBFOX3A6NFN3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RBFOX3A6NFN3 FAM99A-202ENST00000538190 1989 ntBASIC17.58■□□□□ 0.4
RBFOX3A6NFN3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RBFOX3A6NFN3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RBFOX3A6NFN3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RBFOX3A6NFN3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RBFOX3A6NFN3 AC079630.1-202ENST00000618127 1840 ntBASIC17.58■□□□□ 0.4
RBFOX3A6NFN3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RBFOX3A6NFN3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RBFOX3A6NFN3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RBFOX3A6NFN3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RBFOX3A6NFN3 AC087741.3-201ENST00000624270 1347 ntBASIC17.57■□□□□ 0.4
RBFOX3A6NFN3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
RBFOX3A6NFN3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RBFOX3A6NFN3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RBFOX3A6NFN3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RBFOX3A6NFN3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RBFOX3A6NFN3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RBFOX3A6NFN3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RBFOX3A6NFN3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.56■□□□□ 0.4
RBFOX3A6NFN3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RBFOX3A6NFN3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RBFOX3A6NFN3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RBFOX3A6NFN3 AC044849.2-201ENST00000606596 710 ntBASIC17.56■□□□□ 0.4
RBFOX3A6NFN3 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.56■□□□□ 0.4
RBFOX3A6NFN3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RBFOX3A6NFN3 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.56■□□□□ 0.4
RBFOX3A6NFN3 CHML-204ENST00000638121 920 ntTSL 2 BASIC17.56■□□□□ 0.4
RBFOX3A6NFN3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.56■□□□□ 0.4
RBFOX3A6NFN3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.56■□□□□ 0.4
RBFOX3A6NFN3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RBFOX3A6NFN3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RBFOX3A6NFN3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RBFOX3A6NFN3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RBFOX3A6NFN3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RBFOX3A6NFN3 AC080038.3-201ENST00000623346 1952 ntBASIC17.55■□□□□ 0.4
RBFOX3A6NFN3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RBFOX3A6NFN3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RBFOX3A6NFN3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RBFOX3A6NFN3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
RBFOX3A6NFN3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RBFOX3A6NFN3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RBFOX3A6NFN3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RBFOX3A6NFN3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RBFOX3A6NFN3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RBFOX3A6NFN3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RBFOX3A6NFN3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RBFOX3A6NFN3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms