Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 GNRHR2-203ENST00000581100 1187 ntBASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 RN7SL713P-201ENST00000582127 302 ntBASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 CHCHD2P3-201ENST00000603038 451 ntBASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 DNASE1L1-205ENST00000369809 3008 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 ZNF701-204ENST00000540331 5538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 GDA-203ENST00000376986 1771 ntTSL 2 BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 LINC02228-202ENST00000641261 2489 ntBASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 MGST3-203ENST00000367885 680 ntTSL 2 BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 SPTLC1P1-201ENST00000447199 261 ntBASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 AC093214.1-201ENST00000511688 1107 ntBASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 AC025279.2-201ENST00000569730 653 ntBASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 AL132655.2-201ENST00000596276 594 ntBASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 AL356740.1-201ENST00000602192 1297 ntBASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 MIR6720-201ENST00000611664 98 ntBASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 AC132938.4-201ENST00000623835 848 ntBASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 HTR2C-203ENST00000371951 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RCL1Q9Y2P8 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms