Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
SKP1P63208 AC006480.2-201ENST00000609770 1337 ntBASIC13.13□□□□□ -0.31
SKP1P63208 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SKP1P63208 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC13.13□□□□□ -0.31
SKP1P63208 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
SKP1P63208 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC13.13□□□□□ -0.31
SKP1P63208 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
SKP1P63208 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13.13□□□□□ -0.31
SKP1P63208 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SKP1P63208 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
SKP1P63208 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SKP1P63208 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SKP1P63208 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SKP1P63208 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SKP1P63208 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.13□□□□□ -0.31
SKP1P63208 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SKP1P63208 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.13□□□□□ -0.31
SKP1P63208 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SKP1P63208 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SKP1P63208 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.13□□□□□ -0.31
SKP1P63208 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SKP1P63208 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SKP1P63208 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SKP1P63208 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
SKP1P63208 AC040160.2-201ENST00000623816 1675 ntBASIC13.13□□□□□ -0.31
SKP1P63208 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SKP1P63208 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC13.13□□□□□ -0.31
SKP1P63208 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.13□□□□□ -0.31
SKP1P63208 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SKP1P63208 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC13.13□□□□□ -0.31
SKP1P63208 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC13.13□□□□□ -0.31
SKP1P63208 RNA5SP417-201ENST00000516459 108 ntBASIC13.13□□□□□ -0.31
SKP1P63208 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC13.13□□□□□ -0.31
SKP1P63208 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC13.13□□□□□ -0.31
SKP1P63208 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC13.13□□□□□ -0.31
SKP1P63208 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.13□□□□□ -0.31
SKP1P63208 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SKP1P63208 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SKP1P63208 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SKP1P63208 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.13□□□□□ -0.31
SKP1P63208 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SKP1P63208 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SKP1P63208 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SKP1P63208 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SKP1P63208 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SKP1P63208 DDC-204ENST00000426377 1700 ntTSL 3 BASIC13.13□□□□□ -0.31
SKP1P63208 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SKP1P63208 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC13.13□□□□□ -0.31
SKP1P63208 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SKP1P63208 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SKP1P63208 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SKP1P63208 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
SKP1P63208 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SKP1P63208 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SKP1P63208 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.12□□□□□ -0.31
SKP1P63208 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SKP1P63208 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SKP1P63208 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC13.12□□□□□ -0.31
SKP1P63208 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SKP1P63208 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.12□□□□□ -0.31
SKP1P63208 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC13.12□□□□□ -0.31
SKP1P63208 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SKP1P63208 AC091046.1-201ENST00000331871 207 ntBASIC13.12□□□□□ -0.31
SKP1P63208 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC13.12□□□□□ -0.31
SKP1P63208 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SKP1P63208 GGTLC4P-201ENST00000402176 664 ntBASIC13.12□□□□□ -0.31
SKP1P63208 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC13.12□□□□□ -0.31
SKP1P63208 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC13.12□□□□□ -0.31
SKP1P63208 AC098935.1-201ENST00000446057 611 ntBASIC13.12□□□□□ -0.31
SKP1P63208 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC13.12□□□□□ -0.31
SKP1P63208 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SKP1P63208 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC13.12□□□□□ -0.31
SKP1P63208 BATF-202ENST00000555504 361 ntTSL 2 BASIC13.12□□□□□ -0.31
SKP1P63208 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC13.12□□□□□ -0.31
SKP1P63208 AC016629.1-201ENST00000596579 586 ntBASIC13.12□□□□□ -0.31
SKP1P63208 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SKP1P63208 AC091769.1-201ENST00000619576 568 ntBASIC13.12□□□□□ -0.31
SKP1P63208 LINC00244-201ENST00000625073 613 ntBASIC13.12□□□□□ -0.31
SKP1P63208 ST5-261ENST00000626808 1071 ntTSL 5 BASIC13.12□□□□□ -0.31
SKP1P63208 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SKP1P63208 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms