Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC13.19□□□□□ -0.3
CLDN6P56747 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC13.19□□□□□ -0.3
CLDN6P56747 AC004466.2-201ENST00000614749 516 ntBASIC13.19□□□□□ -0.3
CLDN6P56747 AC020904.3-201ENST00000624199 442 ntBASIC13.19□□□□□ -0.3
CLDN6P56747 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC13.19□□□□□ -0.3
CLDN6P56747 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC13.19□□□□□ -0.3
CLDN6P56747 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.19□□□□□ -0.3
CLDN6P56747 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
CLDN6P56747 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC13.19□□□□□ -0.3
CLDN6P56747 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CLDN6P56747 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDN6P56747 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.19□□□□□ -0.3
CLDN6P56747 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CLDN6P56747 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CLDN6P56747 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.18□□□□□ -0.3
CLDN6P56747 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CLDN6P56747 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN6P56747 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CLDN6P56747 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 AC027601.5-201ENST00000624065 2482 ntBASIC13.18□□□□□ -0.3
CLDN6P56747 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN6P56747 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.18□□□□□ -0.3
CLDN6P56747 HSPA7-201ENST00000445535 1927 ntBASIC13.18□□□□□ -0.3
CLDN6P56747 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN6P56747 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.18□□□□□ -0.3
CLDN6P56747 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN6P56747 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC13.18□□□□□ -0.3
CLDN6P56747 PSME2P2-201ENST00000453033 700 ntBASIC13.18□□□□□ -0.3
CLDN6P56747 KRT18P15-201ENST00000458108 1291 ntBASIC13.18□□□□□ -0.3
CLDN6P56747 RNU1-80P-201ENST00000459500 161 ntBASIC13.18□□□□□ -0.3
CLDN6P56747 HNRNPA3P6-201ENST00000472163 1006 ntBASIC13.18□□□□□ -0.3
CLDN6P56747 RN7SL578P-201ENST00000477781 283 ntBASIC13.18□□□□□ -0.3
CLDN6P56747 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC13.18□□□□□ -0.3
CLDN6P56747 RPSAP70-201ENST00000504462 864 ntBASIC13.18□□□□□ -0.3
CLDN6P56747 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC13.18□□□□□ -0.3
CLDN6P56747 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN6P56747 AP000920.1-201ENST00000531824 344 ntBASIC13.18□□□□□ -0.3
CLDN6P56747 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.18□□□□□ -0.3
CLDN6P56747 AC010202.1-201ENST00000551181 405 ntBASIC13.18□□□□□ -0.3
CLDN6P56747 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC13.18□□□□□ -0.3
CLDN6P56747 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN6P56747 KRT8P34-201ENST00000577607 1044 ntBASIC13.18□□□□□ -0.3
CLDN6P56747 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN6P56747 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC13.18□□□□□ -0.3
CLDN6P56747 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC13.18□□□□□ -0.3
CLDN6P56747 CR392039.1-201ENST00000623217 204 ntBASIC13.18□□□□□ -0.3
CLDN6P56747 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 LINC01230-201ENST00000625222 3017 ntBASIC13.18□□□□□ -0.3
CLDN6P56747 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CLDN6P56747 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CLDN6P56747 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.18□□□□□ -0.3
CLDN6P56747 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.18□□□□□ -0.3
CLDN6P56747 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC13.18□□□□□ -0.3
CLDN6P56747 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN6P56747 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN6P56747 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms