Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
APOC4P55056 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 DDC-204ENST00000426377 1700 ntTSL 3 BASIC10.11□□□□□ -0.79
APOC4P55056 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 CYP51A1P3-201ENST00000400072 1428 ntBASIC10.11□□□□□ -0.79
APOC4P55056 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
APOC4P55056 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC10.11□□□□□ -0.79
APOC4P55056 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
APOC4P55056 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC10.11□□□□□ -0.79
APOC4P55056 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC10.11□□□□□ -0.79
APOC4P55056 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC10.11□□□□□ -0.79
APOC4P55056 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC10.11□□□□□ -0.79
APOC4P55056 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC10.11□□□□□ -0.79
APOC4P55056 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC10.11□□□□□ -0.79
APOC4P55056 AC079250.1-201ENST00000456046 531 ntBASIC10.11□□□□□ -0.79
APOC4P55056 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC10.11□□□□□ -0.79
APOC4P55056 OR2A1-AS1-210ENST00000496968 531 ntBASIC10.11□□□□□ -0.79
APOC4P55056 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC10.11□□□□□ -0.79
APOC4P55056 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
APOC4P55056 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC10.11□□□□□ -0.79
APOC4P55056 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC10.11□□□□□ -0.79
APOC4P55056 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC10.11□□□□□ -0.79
APOC4P55056 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
APOC4P55056 AC011471.3-201ENST00000623576 402 ntBASIC10.11□□□□□ -0.79
APOC4P55056 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC10.11□□□□□ -0.79
APOC4P55056 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC10.11□□□□□ -0.79
APOC4P55056 HELLS-212ENST00000630929 400 ntTSL 5 BASIC10.11□□□□□ -0.79
APOC4P55056 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC10.11□□□□□ -0.79
APOC4P55056 AL365181.1-201ENST00000564032 1828 ntBASIC10.11□□□□□ -0.79
APOC4P55056 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC10.11□□□□□ -0.79
APOC4P55056 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC10.11□□□□□ -0.79
APOC4P55056 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC10.11□□□□□ -0.79
APOC4P55056 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
APOC4P55056 FAM46A-202ENST00000369754 5664 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC10.11□□□□□ -0.79
APOC4P55056 AC027601.5-201ENST00000624065 2482 ntBASIC10.11□□□□□ -0.79
APOC4P55056 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC10.11□□□□□ -0.79
APOC4P55056 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 AC008132.1-203ENST00000412938 5920 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
APOC4P55056 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
APOC4P55056 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
APOC4P55056 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
APOC4P55056 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
APOC4P55056 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC10.1□□□□□ -0.79
APOC4P55056 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
APOC4P55056 AC005089.1-201ENST00000619486 2241 ntBASIC10.1□□□□□ -0.79
APOC4P55056 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
APOC4P55056 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
APOC4P55056 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
APOC4P55056 AC040160.2-201ENST00000623816 1675 ntBASIC10.1□□□□□ -0.79
APOC4P55056 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC10.1□□□□□ -0.79
APOC4P55056 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
APOC4P55056 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
APOC4P55056 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
APOC4P55056 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
APOC4P55056 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
APOC4P55056 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
APOC4P55056 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
APOC4P55056 AL357563.1-201ENST00000404728 395 ntBASIC10.1□□□□□ -0.79
APOC4P55056 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC10.1□□□□□ -0.79
APOC4P55056 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
APOC4P55056 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC10.1□□□□□ -0.79
APOC4P55056 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC10.1□□□□□ -0.79
APOC4P55056 AC041040.1-201ENST00000425197 460 ntBASIC10.1□□□□□ -0.79
APOC4P55056 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC10.1□□□□□ -0.79
APOC4P55056 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC10.1□□□□□ -0.79
APOC4P55056 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC10.1□□□□□ -0.79
APOC4P55056 GULOP-201ENST00000454030 748 ntBASIC10.1□□□□□ -0.79
APOC4P55056 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC10.1□□□□□ -0.79
APOC4P55056 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC10.1□□□□□ -0.79
APOC4P55056 RN7SL351P-201ENST00000469306 248 ntBASIC10.1□□□□□ -0.79
APOC4P55056 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC10.1□□□□□ -0.79
APOC4P55056 LINC00634-202ENST00000505157 222 ntBASIC10.1□□□□□ -0.79
APOC4P55056 ALG1L6P-201ENST00000515248 758 ntBASIC10.1□□□□□ -0.79
APOC4P55056 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC10.1□□□□□ -0.79
APOC4P55056 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
APOC4P55056 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
APOC4P55056 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC10.1□□□□□ -0.79
APOC4P55056 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms