Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM23P36406 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM23P36406 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM23P36406 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM23P36406 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM23P36406 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC13.53□□□□□ -0.24
TRIM23P36406 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
TRIM23P36406 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC13.53□□□□□ -0.24
TRIM23P36406 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC13.53□□□□□ -0.24
TRIM23P36406 AC103563.1-201ENST00000429316 123 ntBASIC13.53□□□□□ -0.24
TRIM23P36406 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC13.53□□□□□ -0.24
TRIM23P36406 ASS1P2-201ENST00000439895 1223 ntBASIC13.53□□□□□ -0.24
TRIM23P36406 NALT1-202ENST00000450304 437 ntTSL 3 BASIC13.53□□□□□ -0.24
TRIM23P36406 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC13.53□□□□□ -0.24
TRIM23P36406 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC13.53□□□□□ -0.24
TRIM23P36406 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TRIM23P36406 AC073869.4-201ENST00000620841 800 ntBASIC13.53□□□□□ -0.24
TRIM23P36406 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC13.53□□□□□ -0.24
TRIM23P36406 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC13.53□□□□□ -0.24
TRIM23P36406 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC13.53□□□□□ -0.24
TRIM23P36406 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TRIM23P36406 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM23P36406 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM23P36406 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM23P36406 AC024075.2-201ENST00000598112 1473 ntBASIC13.53□□□□□ -0.24
TRIM23P36406 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM23P36406 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.53□□□□□ -0.24
TRIM23P36406 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM23P36406 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM23P36406 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.53□□□□□ -0.24
TRIM23P36406 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM23P36406 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM23P36406 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM23P36406 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.53□□□□□ -0.24
TRIM23P36406 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
TRIM23P36406 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRIM23P36406 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.52□□□□□ -0.24
TRIM23P36406 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRIM23P36406 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.52□□□□□ -0.24
TRIM23P36406 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRIM23P36406 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRIM23P36406 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.52□□□□□ -0.24
TRIM23P36406 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.52□□□□□ -0.24
TRIM23P36406 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRIM23P36406 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRIM23P36406 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRIM23P36406 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRIM23P36406 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRIM23P36406 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TRIM23P36406 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRIM23P36406 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRIM23P36406 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRIM23P36406 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRIM23P36406 KRT18P4-201ENST00000422599 1288 ntBASIC13.52□□□□□ -0.25
TRIM23P36406 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC13.52□□□□□ -0.25
TRIM23P36406 PSMD4P1-201ENST00000433951 1109 ntBASIC13.52□□□□□ -0.25
TRIM23P36406 AC114501.1-201ENST00000445949 172 ntBASIC13.52□□□□□ -0.25
TRIM23P36406 BPIFB5P-201ENST00000457066 1099 ntBASIC13.52□□□□□ -0.25
TRIM23P36406 AC024293.1-201ENST00000467930 498 ntBASIC13.52□□□□□ -0.25
TRIM23P36406 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC13.52□□□□□ -0.25
TRIM23P36406 REEP5-205ENST00000504247 480 ntTSL 5 BASIC13.52□□□□□ -0.25
TRIM23P36406 PGAM1P12-201ENST00000505622 748 ntBASIC13.52□□□□□ -0.25
TRIM23P36406 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC13.52□□□□□ -0.25
TRIM23P36406 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC13.52□□□□□ -0.25
TRIM23P36406 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRIM23P36406 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRIM23P36406 GOLGA2P7-209ENST00000560408 745 ntBASIC13.52□□□□□ -0.25
TRIM23P36406 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC13.52□□□□□ -0.25
TRIM23P36406 AC006483.2-201ENST00000609813 515 ntBASIC13.52□□□□□ -0.25
TRIM23P36406 KRT8P42-201ENST00000405771 1399 ntBASIC13.52□□□□□ -0.25
TRIM23P36406 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRIM23P36406 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
TRIM23P36406 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
TRIM23P36406 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRIM23P36406 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRIM23P36406 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRIM23P36406 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRIM23P36406 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRIM23P36406 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRIM23P36406 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
TRIM23P36406 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
TRIM23P36406 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
TRIM23P36406 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRIM23P36406 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRIM23P36406 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.52□□□□□ -0.25
TRIM23P36406 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.51□□□□□ -0.25
TRIM23P36406 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRIM23P36406 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRIM23P36406 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRIM23P36406 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.51□□□□□ -0.25
TRIM23P36406 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRIM23P36406 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRIM23P36406 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRIM23P36406 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TRIM23P36406 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.51□□□□□ -0.25
TRIM23P36406 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRIM23P36406 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRIM23P36406 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRIM23P36406 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC13.51□□□□□ -0.25
TRIM23P36406 RHOC-205ENST00000369636 786 ntTSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms